Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1666 ATGACCGTCAAGGAGCTCTTCGATACTGGTCTACTGGATGGGGTTCCCGTAGTTTACATGGGCGGAAAGAAGGCTTCGGGACTGCGAGGCATTATTAAAGATGGAGGAATATTGTGTTCTTGCTGTCTGTGCAATGGACGCAGGATTATTCCACCTTCCCAATTTGAGATTCATGCATGCAAAGCTTATAAGCGAGCAGCACAATACATTTGCCTGGAAAATGGGAAGAGCCTGCTTGAGCTATTGAGAGCTTGCAGAGGAGCTCCCTTACATACTCTGGAGGCGACAATTCAAAACATTGTTTGTTCTCCACCTGATGAAAAGTATTTCACTTGTAAAATGTGCAAGGTATGTTTCCCTCCTTCCTGTGTGGAAAGAGTAGGGTCTATATGCAGTTATTGCAAGGAGTCCAAGGAATCCCAAGACAGTTCTATCGATAAAGTGGGCAAAAGAGTCAGGTCCCCTAGACCACTCTCTGTCTCTAAGCAATCTGATACTTCTGAGAAACGTATCTCTTCGCAGATTAAGAGACACTGGAAGAAAAGAACAAAGTCGCCAAAATGGGTTAGCCGTGCAAAGTCTTCCAAGAATTCTGCAATGTCTATCCTATCACGAAAGAAGAGTCTGTGGAGGATGAAAAAGAAGTCCTCAAAATTATCAGTAAAATTGAAGACTGCAAGAACTACTTCAAATTCAGTGCGTTTATCTTCACCAAACAAGAGTCACTGGAGGGTCACCAAAAAGCACCAGCAGTTGCATAAGTTAGTCTTTGAGGAAGGTGGATTGCCTGATGGAGCCGAAGTAGCTTATTATGCACGTGGACAGAAACTGCTCGAGGGTTACAAAAAGGGCTTTGGAATAATGTGTCGATGCTGCAACTCTGAGGTCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCCCGCAAGAAACCTTATGCATACATCTACACATCAAATGGGGTGTCTCTCCATGAGTTAGCCATATCTCTCTCAAAAGATCGCAAATACTCTGCAAAGGATAATGATGATTTATGCATTATTTGTTGGGATGGTGGAGATCTGTTGCTTTGTGATGGATGCCCAAGGGCTTTTCATAAAGAATGTGCATCTCTGTCAAGTATTCCGCGTGGTAATTGGTACTGTAAGGTTTGCCAAAACATGTTCCAAAGAGAAACTTTTGTGGCACACAATGCCGATGCTGTGGCAGCTGGAAGGGTTGAAGGAGTTGATCCTATTGAGCAGATAACCAAGAGATGTGTGCGCATTGTTGAAGATGTTGATGCTGAGCTCAATGGATGTGCTTTATGCAGGGCTTGTGACTTCAGCAAATCAGGATTTGGTCCACGAACAATAATAATTTGTGATCAGTGCGATAAAGAATTTCATGTTGGCTGCTTGAGGGATCATAAAATGTCATTTTTGAAGGAATTGCCAGAAGGGGATTGGTTTTGTTGCCATGATTGCTCAACCATACATTCTACTTTTCAGAACCTCCTGGTTAGGGGAGCTGAAAAACTTCCAGAACCTCTCTTGGATGTTATAAAGAAGAAGCAAGAGGAAAAAGGTTTAGAATTTGTTAGTGATATTGATGTGAAATGGAGGCTTCTTAAGGGCAAAATTGCTTCTCCTGAAACTAGGCCATTTCTTTTGCAGGCTGTCTCAATCTTTCATGAATGCTTCGATCCTATAGTTGATTCAATTACTGGACGCAATCTTATTACGGCCATGATATATGGAAGGACTGTTCGGAGACAAGAGTTTGGGGCAATGCATTGCGCAATATTAATGGTCAATTCTACTGTGGTATCCGCTGCCTTGCTTCGAATTTTTGGCAGTGATTTGGCAGAACTCCCTCTAGTTGCAACTCGTAGTGTTAACCATGGAAAGGGGTACTTCCAAATATTATACTCGTGCATTGAGAAATTGCTGGCTTCTTTGAACGTGAAGAACCTTGTGTTGCCAGCTACCGCCACTGCAGAGTCCATTTGGATTGAGAAATTTGGGTTCGTAAAGATGACGCCAGACGAGCTTTACAACTACAGAAAGAGCTACCAGCAGATGGTGATATTTCAAGGAACATCCATGCTTCATAAAATGCTCACTCCCTGTCCAGATATCAAAAGTTTATCATGA 2139 0.4296 MTVKELFDTGLLDGVPVVYMGGKKASGLRGIIKDGGILCSCCLCNGRRIIPPSQFEIHACKAYKRAAQYICLENGKSLLELLRACRGAPLHTLEATIQNIVCSPPDEKYFTCKMCKVCFPPSCVERVGSICSYCKESKESQDSSIDKVGKRVRSPRPLSVSKQSDTSEKRISSQIKRHWKKRTKSPKWVSRAKSSKNSAMSILSRKKSLWRMKKKSSKLSVKLKTARTTSNSVRLSSPNKSHWRVTKKHQQLHKLVFEEGGLPDGAEVAYYARGQKLLEGYKKGFGIMCRCCNSEVSPSQFEVHAGWASRKKPYAYIYTSNGVSLHELAISLSKDRKYSAKDNDDLCIICWDGGDLLLCDGCPRAFHKECASLSSIPRGNWYCKVCQNMFQRETFVAHNADAVAAGRVEGVDPIEQITKRCVRIVEDVDAELNGCALCRACDFSKSGFGPRTIIICDQCDKEFHVGCLRDHKMSFLKELPEGDWFCCHDCSTIHSTFQNLLVRGAEKLPEPLLDVIKKKQEEKGLEFVSDIDVKWRLLKGKIASPETRPFLLQAVSIFHECFDPIVDSITGRNLITAMIYGRTVRRQEFGAMHCAILMVNSTVVSAALLRIFGSDLAELPLVATRSVNHGKGYFQILYSCIEKLLASLNVKNLVLPATATAESIWIEKFGFVKMTPDELYNYRKSYQQMVIFQGTSMLHKMLTPCPDIKSLS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1666 712 MobiDBLite consensus disorder prediction 145 196 - -
Lele14g1666 712 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 332 420 IPR013083 -
Lele14g1666 712 SMART PHD_3 437 491 IPR001965 -
Lele14g1666 712 SMART PHD_3 346 387 IPR001965 -
Lele14g1666 712 Gene3D - 540 701 - -
Lele14g1666 712 ProSiteProfiles Zinc finger PHD-type profile. 344 389 IPR019787 -
Lele14g1666 712 Pfam Tify domain binding domain 280 330 IPR032308 -
Lele14g1666 712 Pfam Tify domain binding domain 30 85 IPR032308 -
Lele14g1666 712 ProSitePatterns Zinc finger PHD-type signature. 347 386 IPR019786 -
Lele14g1666 712 MobiDBLite consensus disorder prediction 174 189 - -
Lele14g1666 712 ProSiteProfiles Zinc finger PHD-type profile. 435 493 IPR019787 -
Lele14g1666 712 PANTHER AUTOIMMUNE REGULATOR 1 701 - -
Lele14g1666 712 SUPERFAMILY FYVE/PHD zinc finger 333 390 IPR011011 -
Lele14g1666 712 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 590 683 IPR016181 -
Lele14g1666 712 SUPERFAMILY FYVE/PHD zinc finger 428 490 IPR011011 -
Lele14g1666 712 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 333 410 - -
Lele14g1666 712 Pfam PHD-finger 347 388 IPR019787 -
Lele14g1666 712 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 433 493 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1666 Lele-ChrLele14 24116452 24122871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1666 2 700 PHD Transcription Factor Family AT2G36720 52.727 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele14g1666 TDBD 9.1e-13 No_clan