Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1662 ATGTTGGTTCCTCCATGTCTTGAACCGCTCCTGAACGCATCGTTTTTCAGTGTCTGCCGGATTCACAGAGACGCCGCCCGGAGCGAGTGTAACATGTACTGTCTCGACTGCAATGGCGACCCGTTTTGCTTTTATTGCAGTTCTTCAAGGCACGAGGATCATCAAGTTATTCAGATAAGAAGATCTTCGTATCACGATGTAGTGAGAGCTGCAGAAATCCATAAGGTGCTGGATATAAGTGGAGTACAGACGTATGTGATAAACAGTGCCCAAGTGATGTTTCTGAACGAGAGGCCTCAGCCAAAATCATCGTCATCTGGGAAAGGAGGAGGAGCTCACATTTGCCAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGTTTTTGTTCTTTGGGATGTAAGCTTGAGGGAATAAAGAGAAAAGGGAACGCGAGCTTTGGTTTGGACGGGGCACGAGAAGAAGAATTGCGTGAAGGGTCACAACAAGATATGTATCCGGCCACGCCTCCTCCTCCACCTGCTTCATCTGCAAGAAGAAGAAAAGGCATTCCTCGTAGAGCTCCTTTTGCCTCCTAA 576 0.4774 MLVPPCLEPLLNASFFSVCRIHRDAARSECNMYCLDCNGDPFCFYCSSSRHEDHQVIQIRRSSYHDVVRAAEIHKVLDISGVQTYVINSAQVMFLNERPQPKSSSSGKGGGAHICQICGRSLLDPFRFCSLGCKLEGIKRKGNASFGLDGAREEELREGSQQDMYPATPPPPPASSARRRKGIPRRAPFAS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1662 191 SUPERFAMILY B-box zinc-binding domain 16 60 - -
Lele14g1662 191 MobiDBLite consensus disorder prediction 148 191 - -
Lele14g1662 191 Gene3D Classic Zinc Finger 17 62 - -
Lele14g1662 191 Pfam PLATZ transcription factor 60 135 IPR006734 -
Lele14g1662 191 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1662 Lele-ChrLele14 24086955 24087976 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele14g1662 PLATZ 3e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1662 14 24086955 24087976 Lele15g0699 15 4030031 4031612 hybridization
Lele14g1662 14 24086955 24087976 Lele16g0702 16 3955040 3956570 hybridization