Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1661 ATGTTTAGATTTTGGGGATCACCCGACAGACAATCTCAGCCACACCCTCAGGAAGGCTCTACTTCTACTCAGTCCTGGTACCCTCCATCCGTAGTGACCTCACCCTGTTCTTCTAGGCCTACAACACCAAGTGGCACTTCCTCAAGCAGCTATGGTTCACAGAGACCTACAGAAAGATTTCAGTCTCCTTCACATGTTTCTCCCCCCGAAGCTGCAGGAGTTATTGCTTATCTGAAGGACAACAGTGCTGATGAGCTACGGAAGCTTTTATCTGACAAAGATGCATACCAGCAATTTTTACTTTCGCTTGATCAGGTCAAAATTCAAAACAATTTGAAAGACGAACTTTGCGAGGAGACTACACAGCTTGCAGAGGAAAATCTGCAAAAAGAACCTCGTATTATGGAACTTAAAAATCAGTGTAGAATAATTCGTACAACTGAGTTAGCCACTGCTCAAGAGAAACTAAATGAAATTGAGAAGCAGAAAGAACATGCATTGAAGTTCAGTTCTCCAGCTTCCTTTCTTCAACAGCTCCAAGAGGCTATGAGTAAGGCAGAAGAGGAATCTGAAAATCTGCACCAGCAACTCCTTGATAGAGAAATTGAACTTGGAGCTTTCTTGCAGAAATACAAGAAGCTTCGTACCAATTACCACAAGAGAGCTCTCTTGCATCTTGCGGCTGGAACATCAAGTGCATGA 702 0.433 MFRFWGSPDRQSQPHPQEGSTSTQSWYPPSVVTSPCSSRPTTPSGTSSSSYGSQRPTERFQSPSHVSPPEAAGVIAYLKDNSADELRKLLSDKDAYQQFLLSLDQVKIQNNLKDELCEETTQLAEENLQKEPRIMELKNQCRIIRTTELATAQEKLNEIEKQKEHALKFSSPASFLQQLQEAMSKAEEESENLHQQLLDREIELGAFLQKYKKLRTNYHKRALLHLAAGTSSA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1661 233 Coils Coil 149 169 - -
Lele14g1661 233 Coils Coil 176 203 - -
Lele14g1661 233 SUPERFAMILY Endosomal sorting complex assembly domain 174 221 IPR037202 -
Lele14g1661 233 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 11 231 - -
Lele14g1661 233 Pfam Modifier of rudimentary (Mod(r)) protein 80 222 IPR009851 -
Lele14g1661 233 MobiDBLite consensus disorder prediction 1 68 - -
Lele14g1661 233 MobiDBLite consensus disorder prediction 10 64 - -
Lele14g1661 233 ProSiteProfiles VPS37 C-terminal domain profile. 153 233 IPR009851 -
Lele14g1661 233 Gene3D Helix hairpin bin 155 226 IPR029012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1661 Lele-ChrLele14 24081153 24084174 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1005 06 6233712 6235953 Lele14g1661 14 24081153 24084174 CCT
Lele08g0990 08 6287745 6289918 Lele14g1661 14 24081153 24084174 CCT
Lele14g1661 14 24081153 24084174 Lele15g0700 15 4034432 4036879 hybridization
Lele14g1661 14 24081153 24084174 Lele16g0703 16 3958582 3962781 hybridization