Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1659 ATGGCGGAATCAGCATCTGGTGACTCCTCCAACCCCACCCCTCCTCCGGAGATCAAACCAGCGGCTACCGAGTATAAAAGCTGGGCCGATGAAGCTGAGGAAGAAGTTCAACAGGAAACGAATGCCGTCTCCAGTTCATCATCAGTGTCATCGCTTAACGTTGACGGATTGGCCATTGATGAGAATAAGAATACTACTAAGTTCTTGGACGAACCGGAGGACTCCAACATTCAAGCGGTTACTTCTGGTGATACTCCATACACCTCAGCTAGCACCTTTGAAGATTTGAATCTCTCTCCAGAGCTGCTAAAAGGATTGTATGTTGAGATGAAATTTCAGAAGCCTAGCAAAATTCAAGCTATCAGTTTGCCAATGATCTTAAGCCCTCCTTTTAAGGATCTGATTGCACAGGCACATAATGGTTCAGGCAAGACAACATGTTTTGTGCTTGGTATGCTAAGTCGTGTTGACCCCAAGCTGAAGGCTCCTCAAGCTCTTTGCATTTGTCCAACTAGAGAATTGCTATTCAGAGGTAATTTTAGCACATTAGTGAACTTTAATGTTGCTTTATCATATATTGAAGCTTCACAGTTCTCTAAACTAGGCTTGCAAATTTCTCATCACTCTCCGTATGATTCTTTGAGGATAATGAAAGATATAGAAAGAGTCAATAATAACTGTCAGGTTCTTCTGTTTTCTGCTACATTTAATGAGACTGTCAAGAATTTTGTTTCGAGAACAATTGAAGTGATCAAAGATTACATCTTTGAGATAGGAGAGAATGTGGGCCAAACTATCATATTTGTGCGCACAAGAAATAGTGCAAGCATGTTGCACAAAGCACTGGCTGATTTGGGCTACGAGGTCACTTCTATACAAGGCGCTCTTCAGCATGACGAGAGAGATAAGATTGTCAAAGAGTTCAGAGATGGTTTGACTCAAGTTCTGATATCAACTGATGTTCTTGCCCGAGGCTTTGATCAACAACAGGTTAATTTGGTTATTAATTATGATCTTCCGGTGAAACATACTGCGGAGTATACTCGTGGGCGTGAACAGGAGCCCGATTATGAGTCCTTGTTAAATTGTAATGTTTCATTTAAAATAAGAAAATCTGTCCTGCTGCTTGTTCGACGTGATCCTGCAGGGGCCGTATTTAACCTCATATGTGATGAAAGGGATGCAAATCTCATGGCGAAGATCGAGAGGCACTTTGGCACCCATGTAACTGAGGTCCGAGAAAAAGCCGTTGAAGACTATAAAGGAGCTCTTAGGGAGGCGGGTTTGTTGCAATGA 1296 0.4228 MAESASGDSSNPTPPPEIKPAATEYKSWADEAEEEVQQETNAVSSSSSVSSLNVDGLAIDENKNTTKFLDEPEDSNIQAVTSGDTPYTSASTFEDLNLSPELLKGLYVEMKFQKPSKIQAISLPMILSPPFKDLIAQAHNGSGKTTCFVLGMLSRVDPKLKAPQALCICPTRELLFRGNFSTLVNFNVALSYIEASQFSKLGLQISHHSPYDSLRIMKDIERVNNNCQVLLFSATFNETVKNFVSRTIEVIKDYIFEIGENVGQTIIFVRTRNSASMLHKALADLGYEVTSIQGALQHDERDKIVKEFRDGLTQVLISTDVLARGFDQQQVNLVINYDLPVKHTAEYTRGREQEPDYESLLNCNVSFKIRKSVLLLVRRDPAGAVFNLICDERDANLMAKIERHFGTHVTEVREKAVEDYKGALREAGLLQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1659 431 CDD SF2_C_DEAD 260 351 - -
Lele14g1659 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 175 IPR027417 -
Lele14g1659 431 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 125 254 IPR014001 -
Lele14g1659 431 Pfam Helicase conserved C-terminal domain 254 347 IPR001650 -
Lele14g1659 431 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 58 177 - -
Lele14g1659 431 Gene3D - 69 187 IPR027417 -
Lele14g1659 431 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 91 120 IPR014014 GO:0003724
Lele14g1659 431 Gene3D - 236 423 IPR027417 -
Lele14g1659 431 Pfam DEAD/DEAH box helicase 117 175 IPR011545 GO:0003676|GO:0005524
Lele14g1659 431 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 250 421 IPR001650 -
Lele14g1659 431 MobiDBLite consensus disorder prediction 1 49 - -
Lele14g1659 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 345 IPR027417 -
Lele14g1659 431 SMART helicmild6 276 353 IPR001650 -
Lele14g1659 431 SMART ultradead3 111 267 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1659 Lele-ChrLele14 24074821 24078198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1659 92 412 Eukaryotic Initiation Factors Gene Family AT1G72730 28.354 1.16e-27 112