Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1645 ATGAATGAAAGTAGCTACTTACTGGGAGAAGAATATATGCAGAATTGGGAGAGAGCATGTTTCTACTTTCCGGGAAAACAAGGGAAGAATACTGTGCTGCTTCTGCAAGAACACGCAAGAGGTGGAAACGATGCAGAGAAAGGAAACATAATTGTTACTCGCATTGGTTTTGAGTCAGACCAGTGTAGCGGAAAGAGGAAGAAGGAAGAAGTAAAAGGTTGCAGGCAAGAAGGATTGAAGTGGGTGAAGCTCAAGTACAAAGAATTCATGCTGGAATGGGAGATTACTGATTTGCGTGGAAAATGGAAGAAACATTCAACGAAAGCATCCGCACTTGAGTTTCACTTTGTGAATAGCCAGCTGAATATGGAATGGAATGCAAGCATCAGACCCTTTGTTCCCAGACCTGAGTCTTCCTTAAGTTTCCTCTACAACTGTAACTGCAGCCCATATCCAGGAATGGAAGTGAAACATGCAGCAGCAGCACAAGGGTTGGTTCCGGACGTGGAGAAAATAAAGTACGGGAACCAGATGGAGAAGAAGAATCGACTAACGAGCGATCAGCTTGAGTCGCTGGAGAGGAGCTTCCAGGAGGAGATAAAGTTGGACCCTGATAGGAAGATGAAGCTCTCAAGGGAGCTAGGGCTTCAGCCTCGTCAGATTGCTGTATGGTTTCAAAATAGGCGGGCTAGGTGGAAGGCTAAGCAGCTCGAGAACTTGTATGATGCCCTCAAACAAGAATTTGATGCTATCTCTGTGGAAAAACAGAGGCTTCAAGAAGAGGTTGTGAAGTTGAAGGCAATACTAAGAGAGCAAGCTTCAAAGACACAGGTTTCTGCAGGTCACACAGAAGTTTCGGGGGAAGAAACAGTGGAAAGCACGTCAGAGGCAGCACTGCGTGGGTCTAACAAGCAGCCACGGGGAATAATGAGCCATCATCAGCATCAGCAGAATATTGCAGAAGCCAATTGTTCTTTCACAGTAGAGGATTATAGCACTGTTTCACTGCCCTACTGGCCAGCTCTTGTGCCTTATTATCCTTAA 1044 0.4559 MNESSYLLGEEYMQNWERACFYFPGKQGKNTVLLLQEHARGGNDAEKGNIIVTRIGFESDQCSGKRKKEEVKGCRQEGLKWVKLKYKEFMLEWEITDLRGKWKKHSTKASALEFHFVNSQLNMEWNASIRPFVPRPESSLSFLYNCNCSPYPGMEVKHAAAAQGLVPDVEKIKYGNQMEKKNRLTSDQLESLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLENLYDALKQEFDAISVEKQRLQEEVVKLKAILREQASKTQVSAGHTEVSGEETVESTSEAALRGSNKQPRGIMSHHQHQQNIAEANCSFTVEDYSTVSLPYWPALVPYYP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1645 347 CDD homeodomain 180 236 IPR001356 GO:0003677
Lele14g1645 347 PRINTS Lambda-repressor HTH signature 215 231 IPR000047 GO:0003677
Lele14g1645 347 PRINTS Lambda-repressor HTH signature 206 215 IPR000047 GO:0003677
Lele14g1645 347 SMART HOX_1 177 239 IPR001356 GO:0003677
Lele14g1645 347 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 174 310 IPR045224 GO:0003700
Lele14g1645 347 Pfam Homeodomain 180 233 IPR001356 GO:0003677
Lele14g1645 347 FunFam Putative homeobox-leucine zipper protein ATHB-51 177 240 - -
Lele14g1645 347 ProSitePatterns 'Homeobox' domain signature. 210 233 IPR017970 GO:0000981|GO:0006355
Lele14g1645 347 SUPERFAMILY Homeodomain-like 172 237 IPR009057 -
Lele14g1645 347 Coils Coil 227 275 - -
Lele14g1645 347 Gene3D - 173 242 - -
Lele14g1645 347 ProSiteProfiles 'Homeobox' domain profile. 175 235 IPR001356 GO:0003677
Lele14g1645 347 Pfam Homeobox associated leucine zipper 235 269 IPR003106 GO:0006355|GO:0043565
Lele14g1645 347 MobiDBLite consensus disorder prediction 279 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1645 Lele-ChrLele14 24007614 24013764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1645 123 265 Homeobox Transcription Factor Family AT5G03790 56.173 1.14e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele14g1645 Homeodomain 7.2e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1645 14 24007614 24013764 Lele16g0716 16 4035952 4037238 hybridization