Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1637 ATGGAAGAAAAAGATGTCCATGTTTTCGGGTCACCCGGAAACTCAGACTCCGGGCAGCATCTCCAACCCTTCGGAGTCTCCTTGCCTCAGGTAACGAACATGACGGTGAATATGAACCTGCAGAATAGTGGAGGCGCAACAGTTGGAGACGCCGCAACAATGGCATCGCCTGCAAGTACCGGAGGAGTTGGGCCGGGGAGTTTTGATTTGTTCGGGAAAAAGAAGAGAGGGAGGCCGAGAAAATATGATTCAGATGGGAAGCCGAGGGTGACGACGACGTCGTATCAGGGTGCACCATCACAACAAGGCTTTTCTTTGTCCCCAACTTCACCTTCTGAATTCTCCTCCAAAAGGGGTCGAGGCAGACCACCTGGCTCCGGCAACTGGCAGCTTCTCGCATCTCTAGGTGAGTTGTTTGCAAACACAGCAGCTGGGGATTTCACACCTCATGTCGTCACTGTTCATACTGGAGAGGATGTTGCCGGAAAAATCCTGACATTTGCCCAGAAAGGTACCAGAGGAGTTTGCGTTCTTTCTGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCCGGTGGCTTATTAACATACGAGGGTCGGTTCGAGATCTTGTCTCTGTCAGGGTCATACACAGCGTCTGATAATGGTGGCATAAAAAGTCGAACCGGTGGGTTGAGTGTCTCACTGGCTGGCCCTGACGGTCGTGTGATCGGTGGTGGTGTTGCTGGTCTATTGACTGCTGCTAGCCCAATCCAAATTGTGATTGGAAGCTTCATGCCGTATAGTCAAAAGGCACAGAAAAGAAAGCAACATCGCGAGAACACAGCGGCATCTCCAGTCTCTGCAGCATCTTCCAGAACAAAGCCACAGAGAATCAGACAACATTACAAGCAGCGATAA 912 0.5077 MEEKDVHVFGSPGNSDSGQHLQPFGVSLPQVTNMTVNMNLQNSGGATVGDAATMASPASTGGVGPGSFDLFGKKKRGRPRKYDSDGKPRVTTTSYQGAPSQQGFSLSPTSPSEFSSKRGRGRPPGSGNWQLLASLGELFANTAAGDFTPHVVTVHTGEDVAGKILTFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSYTASDNGGIKSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVIGSFMPYSQKAQKRKQHRENTAASPVSAASSRTKPQRIRQHYKQR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1637 303 MobiDBLite consensus disorder prediction 71 87 - -
Lele14g1637 303 MobiDBLite consensus disorder prediction 279 293 - -
Lele14g1637 303 MobiDBLite consensus disorder prediction 88 116 - -
Lele14g1637 303 MobiDBLite consensus disorder prediction 1 22 - -
Lele14g1637 303 Pfam AT hook motif 117 126 IPR017956 GO:0003677
Lele14g1637 303 Pfam AT hook motif 73 84 IPR017956 GO:0003677
Lele14g1637 303 MobiDBLite consensus disorder prediction 42 128 - -
Lele14g1637 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 270 - -
Lele14g1637 303 ProSiteProfiles PPC domain profile profile. 144 287 IPR005175 -
Lele14g1637 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 149 262 IPR005175 -
Lele14g1637 303 Gene3D - 149 281 - -
Lele14g1637 303 CDD DUF296 148 262 IPR005175 -
Lele14g1637 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 50 285 IPR039605 GO:0003680
Lele14g1637 303 PRINTS AT-hook-like domain signature 115 126 IPR017956 GO:0003677
Lele14g1637 303 PRINTS AT-hook-like domain signature 73 83 IPR017956 GO:0003677
Lele14g1637 303 MobiDBLite consensus disorder prediction 268 303 - -
Lele14g1637 303 SMART AT_hook_2 73 85 IPR017956 GO:0003677
Lele14g1637 303 SMART AT_hook_2 117 129 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1637 Lele-ChrLele14 23951895 23954154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1637 73 288 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 51.739 2.21e-68 215