Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1635 ATGGATCGGCTTTCATCCACGACTATTCTGCCGGATGTGTTTCAAGGGGCCAGAGATGGCATTGCCCTGATTTGGAGTCAAATCAAGACCCCATTGATCGTTCCGCTTCTGAGAATAGCAGTGGTTCTGTGCCTGATCATGTCCTTGCTGATGTTCGTGGAGAGGGTGTACATGGGCGTTGTCATTACGTTGGTGAAACTATTCGGTCGAAAACCAGAGAAGCGTTACAAATGGGAGGCAATGAAGGACGACGTAGAGCTGGGCAACTCAGCTTATCCAATGGTGCTCGTTCAAATCCCAATGTACAACGAAAGAGAGGTATATCATCTGTCCATTGGAGCAGCTTGTGGGCTTTCTTGGCCTTCAGATAGGATCATAATACAAGTTCTGGACGATTCCACAGACCCGACGATTAAGAGCTTGGTGGAGATGGAGTGCCAGAGATGGGCGAGCAAAGGCATAAACATAAAGTACGAAATAAGGGACAACAGAAACGGGTACAAAGCAGGGGCTCTGAAAGAGGCAATGAAGCGTAGCTACGTGAAGCAATGCGACTACGTTGCCATTTTAGACGCTGATTTTCAGCCAGAACCTGATTTCCTCTGGCGCACCGTCCCTTTCCTCCACCACAATCCTCAACTCGCTCTTGTTCAGGCTCGGTGGAAGTTCGTGAATTCGGACGAGTGTTTGATGACTAGGATGCAGGAGATGTCGTTGGATTATCATTTTACTGTGGAACAAGAAGTGGGCTCTTCCACTTACGCCTTCTTCGGATTCAATGGGACTGCGGGAGTATGGAGAATCTCGGCTCTGAACGAGGCTGGTGGCTGGAAGGATAGGACCACTGTGGAAGACATGGACCTCGCCGTGAGAGCCAGTCTCAAAGGCTGGAAATTCCTCTACTTAGGCAATTTACAGGTTAAAAACGAACTGCCGAGCACTTTCAAGGCGTATCGCTACCAACAGCATCGCTGGTCATGTGGTCCGGCCAATCTTTTCAGGAAAATGGTGTGGGAGATTATGACCAACAAGAAAGTGTCCTTGTGGAAGAAGATACATGTGATATACAGCTTCTTTTTTGTTCGGAAAGTCATAGCCCACATCAACACATTCATATTCTATTGCGTAGTATTGCCAGCAACCGTCCTGGTGCCTGAGGTCGTTGTCCCTAAGTGGGGAGCTGTATATATCCCTTCCATCATCACCCTTCTTAATGCAGTTGGAACTCCCAGGTCATTGCATTTACTAGTCTTTTGGATTCTGTTTGAGAATGTCATGTCTCTGCATCGAACGAAGGCAACAATTATTGGGCTGGTAGAGGCGAGTCGAGTGAATGAATGGATTGTTACTGAAAAACTTGGAGATGCTCTCAAAGCTAAAGCAGGCACGAAAACATCCAAGAAGCCTCGTTTACGGATTGGAGACAGGGTTCACTTGTTAGAGCTTGGGGTTGGATTATACCTCTTCGTATGTGGCTGCTGTGATTTCCTGTTTGGGAAAAACCACTACTTCATATTTCTCTATATACAAGCAGTTGCCTTCTTCATCATGGCGTTTGGATATGTTGGCACCTTTGTTCCCTGCTGGTAG 1590 0.4717 MDRLSSTTILPDVFQGARDGIALIWSQIKTPLIVPLLRIAVVLCLIMSLLMFVERVYMGVVITLVKLFGRKPEKRYKWEAMKDDVELGNSAYPMVLVQIPMYNEREVYHLSIGAACGLSWPSDRIIIQVLDDSTDPTIKSLVEMECQRWASKGINIKYEIRDNRNGYKAGALKEAMKRSYVKQCDYVAILDADFQPEPDFLWRTVPFLHHNPQLALVQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLGNLQVKNELPSTFKAYRYQQHRWSCGPANLFRKMVWEIMTNKKVSLWKKIHVIYSFFFVRKVIAHINTFIFYCVVLPATVLVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLVEASRVNEWIVTEKLGDALKAKAGTKTSKKPRLRIGDRVHLLELGVGLYLFVCGCCDFLFGKNHYFIFLYIQAVAFFIMAFGYVGTFVPCW 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1635 529 FunFam Glucomannan 4-beta-mannosyltransferase 9 84 312 - -
Lele14g1635 529 Pfam Glycosyl transferase family group 2 186 381 IPR001173 -
Lele14g1635 529 CDD CESA_CaSu_A2 93 329 - -
Lele14g1635 529 SUPERFAMILY Nucleotide-diphospho-sugar transferases 90 372 IPR029044 -
Lele14g1635 529 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 84 310 IPR029044 -
Lele14g1635 529 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 20 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1635 Lele-ChrLele14 23940081 23943629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1635 1 527 Miscellaneous Gene Families AT5G03760 80.639 0.0 916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2674 05 42644547 42649655 Lele14g1635 14 23940081 23943629 CCT
Lele14g1635 14 23940081 23943629 Lele05g1128 05 7040708 7045832 CCT
Lele14g1635 14 23940081 23943629 Lele15g0721 15 4164510 4168409 hybridization
Lele14g1635 14 23940081 23943629 Lele16g0728 16 4104326 4108268 hybridization