Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1632 ATGAGAAAACTCGGTATGAAAAAACCCCGATTGCACAACGAGCTCGAGTGCGACCCAAATCAAAGTGTTCGACCATTTCCTCAGCGACAGGTGGCTTCTGGGGTTAGTACGTTGGCCTCGGCAAGGCTTAGAACAAACGACAGAGATCCGGGAGGCAATGATTCAGGTCGCGGTCCCCAGCAACTGCTGCATCAGGAGCTTGTGACTCGGTATAAGACTGCGCTTGCTGAGCTGACTTGTAATTCAAAACCAATAATTACGAACTTGACTATAATTGCAGACGAGAATGTCTATGCGGCCAAGGCAATTGTTTCGACTGTTTGCTCTAATATTCTAGAGGTGCCTAGTGAGCAAAAGCTGCCATCACTCTATTTGCTGGACAGTATAGTTAAGAATATTGGGCGGGAATATATTAAATACTTTGCTGCCAAACTACCTGAGGTATTTTGCAAGGCTTACAGACATGTTGATTCATCCGTCCATTCAAGCATGAGGCATCTTTTTGGAACTTGGAAAGGAGTATTTCCTCTTCAGACCCTTCAGATGATTGATGAGGAACTGGGTTTTACTCCAGCTGCCAATGGCTTATCTTCTCCATCTCCATCAACTATGCTCAGGAGTGATTCACAATCACAGCACCCTCCTCATGGTATCCATGTGAATCCCAAGTATTTAGAAAAGCAACGGCTTCAGCAATCCAGTAGGGTAGGTGAAGTGTTTGGACTGGAAAGTTTTCCTCGAATTTTTAAAAGTGTTCTGAAGTCTTCTAATGCCATAGGTACAGCTAATGATGTGACTGGAACTATTGCAAGCTCAACTGAGGACTCAGATAGACTGGATAGAGCTATGGTTACTGCCCGACCTTGGGCAGATCCCAGACTTAACATGCGTAACATTAAGCCTGCTAATAGAGATGAATTTAATGGTTCTCTTCCTGAAAAGAACATCAGTGCCTCCTATGGAGGCAATGGACAAGGTTCCACTCTTTCTAGTAAAGTGGGCTTGGGCATCGGAAAAACTGGTGGTAGGGTCACTGATTTTGGACATGACAAAATATGGTACAAATCAGGCAGTGATATTGGAGAGGTTAAGTCTGGGCAAAGAAATGGGTTAAGTCTCGAGCATGGTATTTCAATTCGTGAAGCAACAAAGTCATTAAATTTGGATGCACGTCAGCCATCAACACGAAGCTTAACTGAAATACCTATGAGGAATAGTGTGATATCAATGAGTTGGAGAAATTCTGAGGAAGAGGAATTCATGTGGGACAATATGAACTCTGGGGTGACTGATAACACTGCATCCAGTCTCTCTAGTGACTTGGGTAAAGATCATTGGACTGCTGATGATGAAGGCTTGGATTCACCGCTATCATGGCAATTGCAAGGGCGGCATATATTTGATGAGCTGAATTGTAAGCCAGGTCACACGGAAGGCTTTGCAACCACTGGTCGGTTACCATCAGTTACGAAGTCCTCTGCTATCATGATGGGTAATCGGCCTTTCCTGTCAAATGCAACAGCACGAGTGGTGGGACAGCATAAATATCACACCGTTCAAGCTGAAACCCCTTTGGATGAACAGTCTCCTTCATTGCAAGAAACAGCCTGCCAGCCTCACCGCGAGCGACATTTGGCTGAGCAAGAAAACAAACAGACTCTTAAAACATCTCATTTTTCTGGAGATCTGCAGGGCAAATATATTCAAGATTCTTCAGCCGCCCGTTCTTCTAATATTCAGGTTGTCAAGTTGCAAAAATCACAACAAAGGGACTTGCATGGTCCAGCACCTTCATTGACTTATTCTCAACCACGGCATTGTACTGGAGTTTTCCCAAAGCAACACACTGGCTCTTCTCTTCCTGAAGTTTCTGATAATACAGAGAAGCTTGCCAGTGAAACTTCTGATCAGTCAACATCAAGTGGTTTGTTAGCTGCAGTTATGCAGAGTGGAATTCTTAATACTTCAACTATGAATAATCTACTTTCTAGAAGTTTCCTGGATACAAGGATTCTGCCATTACAAACAGGGAATCAGCCTACGCAGCCAGGTGGGCCTCGGGGGAAGGCTGCATCTCCATCTCCATCTGGTTCTTCAAAAGGAGACTCATCTCATCTGACAAAAATATCTCAAGGAAAGGTTGAACAACCACCTAGGGCATCTGATCCACCTCCAGCTTCCTCTACTGTGAGTAGTACCTCAACTCGGACCTCAAATTGCATCAATGCCTCGAGTCCAATTTCAACCCTTTTAAGCTCATTAGTTGCAAAGGGTTTGATATCTGCAAAGTCAGAGTCATCAATTAAGGCTCCAACTGATATGCTGAGTCGTTTGGAAGATCAAAGCCACAGCATTAGCACAAGTAGCTCTTCACCAGTTGCTTCTGTCTCTGGTTCTCCAGCTGTCCATGTATCATCAATTGGAGATGAGGTAGACCATGATGTAAACAGCTCTGTTTCCTTATCTCAGTCAACCACCACAGAAATAAGAAATCTTCTTGGCTTTGAGTTTAAGCCCGATGTAATCCGACAATTCCATCCATCTGTGATCAGTGAACTATGGGATGATCTTCCACATCATTGCAGCATTTGTGGCCTTAGGCTTACACATCAAGAACAATTTAATGGACACTTGGTATGGCATGCTACAAGGGAAAAGGAACAAAATGGTCTAATTCCGGCATCAAGAAGATGGTATGTGCAGCCATGTGAGTGGATTACTGGCAAAGTCGAATATTCAACTGAGTCTGAGTCTACCAATTCTTTAGACGTATACCTTGAGAAAGTAGACAAGACTGAACTGGATACAATGGTTCCATCAGATGAAAATCAATGCTTGTGTGTGTTCTGTGGGGAGCTATTTGAAGATGCTTACTGTCAAGAAAGGGATGAGTGGATGTTCAAGGGGACTACTTATCTGACCAATTCAGACAATGGTGTTGAGATGGCTAGCAGAAATGTCATTACTGCTAGGGGTCCCATTATCCATGCAAAATGTTTATCAGAGACCTCAATAATCAGTGTCCCACAGATGGAACAGGTTTAA 3045 0.4368 MRKLGMKKPRLHNELECDPNQSVRPFPQRQVASGVSTLASARLRTNDRDPGGNDSGRGPQQLLHQELVTRYKTALAELTCNSKPIITNLTIIADENVYAAKAIVSTVCSNILEVPSEQKLPSLYLLDSIVKNIGREYIKYFAAKLPEVFCKAYRHVDSSVHSSMRHLFGTWKGVFPLQTLQMIDEELGFTPAANGLSSPSPSTMLRSDSQSQHPPHGIHVNPKYLEKQRLQQSSRVGEVFGLESFPRIFKSVLKSSNAIGTANDVTGTIASSTEDSDRLDRAMVTARPWADPRLNMRNIKPANRDEFNGSLPEKNISASYGGNGQGSTLSSKVGLGIGKTGGRVTDFGHDKIWYKSGSDIGEVKSGQRNGLSLEHGISIREATKSLNLDARQPSTRSLTEIPMRNSVISMSWRNSEEEEFMWDNMNSGVTDNTASSLSSDLGKDHWTADDEGLDSPLSWQLQGRHIFDELNCKPGHTEGFATTGRLPSVTKSSAIMMGNRPFLSNATARVVGQHKYHTVQAETPLDEQSPSLQETACQPHRERHLAEQENKQTLKTSHFSGDLQGKYIQDSSAARSSNIQVVKLQKSQQRDLHGPAPSLTYSQPRHCTGVFPKQHTGSSLPEVSDNTEKLASETSDQSTSSGLLAAVMQSGILNTSTMNNLLSRSFLDTRILPLQTGNQPTQPGGPRGKAASPSPSGSSKGDSSHLTKISQGKVEQPPRASDPPPASSTVSSTSTRTSNCINASSPISTLLSSLVAKGLISAKSESSIKAPTDMLSRLEDQSHSISTSSSSPVASVSGSPAVHVSSIGDEVDHDVNSSVSLSQSTTTEIRNLLGFEFKPDVIRQFHPSVISELWDDLPHHCSICGLRLTHQEQFNGHLVWHATREKEQNGLIPASRRWYVQPCEWITGKVEYSTESESTNSLDVYLEKVDKTELDTMVPSDENQCLCVFCGELFEDAYCQERDEWMFKGTTYLTNSDNGVEMASRNVITARGPIIHAKCLSETSIISVPQMEQV 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1632 1014 MobiDBLite consensus disorder prediction 725 742 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 692 711 - -
Lele14g1632 1014 Gene3D - 58 188 IPR008942 -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 198 218 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 522 536 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 521 559 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 579 640 - -
Lele14g1632 1014 SMART 558neu5 66 188 IPR006569 -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 537 551 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 775 804 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 198 216 - -
Lele14g1632 1014 ProSitePatterns Zinc finger C2H2 type domain signature. 861 881 IPR013087 -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 775 802 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 674 742 - -
Lele14g1632 1014 CDD CID_Pcf11 68 187 - -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 39 61 - -
Lele14g1632 1014 Pfam CID domain 74 181 IPR006569 -
Lele14g1632 1014 FunFam polyadenylation and cleavage factor homolog 4 60 188 - -
Lele14g1632 1014 ProSiteProfiles CID domain profile. 63 191 IPR006569 -
Lele14g1632 1014 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 59 1004 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Lele14g1632 1014 SUPERFAMILY ENTH/VHS domain 65 187 IPR008942 -
Lele14g1632 1014 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1632 Lele-ChrLele14 23921835 23927075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1632 66 425 C2H2 Transcription Factor Family AT4G04885 35.068 8.42e-52 194