Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1624 ATGGACTTGTATCTGAAGCAATGGAGAAACCCGGATGAGTCAGTGGCAGAGGAACATCATTCTACAAAGATGCCAAAACTTGTTCTCGAACCTCATCAAAAGCCTCAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCTCAACCCAACACTAAAGTCAGCACCTTGTCAGCATTCTCTGATTCAACCTCAGCATCTCCCAGACCTTCCCGGATTGGGGGTTATTTCAGCTTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCAGGCGCTGCGGTGCCTCCTGAGCTTCTTCATCCAATCAAGAAAAGCTTTCTTCAATCTCCTTCCTATTTCCTCCAACACTACCAACACTATGACCCAGCCTTAGCATTGCAATCAGGGTATTGGGGAAGGGCAGCCATGGATCCAGAGCCAGGCCGGTGCCGGAGGACTGACGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTGCTGGCCAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAACGCTGCCGGCGGCGGCGGAGGCTCTGTCGGTGCTCCAATATCTATGCATGCGCCGTCATTGTCCACGGCTTCACTGAGTTCCCCCTACGATCTCCATCTTCATCAAAGGTAA 684 0.5234 MDLYLKQWRNPDESVAEEHHSTKMPKLVLEPHQKPQSSASALPLFVPQPNTKVSTLSAFSDSTSASPRPSRIGGYFSLAQWQELELQALIFRYMLAGAAVPPELLHPIKKSFLQSPSYFLQHYQHYDPALALQSGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPNAAGGGGGSVGAPISMHAPSLSTASLSSPYDLHLHQR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1624 227 MobiDBLite consensus disorder prediction 174 207 - -
Lele14g1624 227 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele14g1624 227 Pfam WRC 144 186 IPR014977 -
Lele14g1624 227 PANTHER GROWTH-REGULATING FACTOR 5 50 208 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele14g1624 227 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele14g1624 227 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele14g1624 227 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1624 Lele-ChrLele14 23867529 23868663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1624 1 189 GRF Transcription Factor Family AT2G36400 59.799 1.56e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele14g1624 WRC 1.1e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1095 05 6808068 6809993 Lele14g1624 14 23867529 23868663 CCT
Lele14g1624 14 23867529 23868663 Lele15g0733 15 4235883 4238083 hybridization
Lele14g1624 14 23867529 23868663 Lele16g0738 16 4180847 4181974 hybridization