Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1622 ATGGCGAGGGTAGTGTGCCGCATAGGTGACACCCATGGTCACGTCACCAAGCTCCAAAACTTGTGGGCTAACCTCGAAAAGGAAATCCAGCCTCCGTTATTTCAACCTGCCATCACTGTCTTCTTGGGGGATTACTGCGACCGCGGTCCCCATACTCGTCAAGTTATTGATTTCCTGATTCAGTTACCCACTAGATACCCGAATCAGAAACACGTCTTCCTCTCCGGCAACCATGAGTTCGCCTTCTCTGCCTTTCTGGGTCTTCTGCCTCTGCCGCCTGATGGCTCGAAGTTCTCCGACGCCTGGAAAGAGTTCGAGGCCAGCGAGGATAGAGAAGGATGGTACAAGGGTGATGGTTATGAAAATATGCGTCGTTAG 378 0.5185 MARVVCRIGDTHGHVTKLQNLWANLEKEIQPPLFQPAITVFLGDYCDRGPHTRQVIDFLIQLPTRYPNQKHVFLSGNHEFAFSAFLGLLPLPPDGSKFSDAWKEFEASEDREGWYKGDGYENMRR 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1622 125 Gene3D - 2 125 IPR029052 -
Lele14g1622 125 Pfam Calcineurin-like phosphoesterase 8 105 IPR004843 GO:0016787
Lele14g1622 125 SUPERFAMILY Metallo-dependent phosphatases 8 107 IPR029052 -
Lele14g1622 125 PANTHER TYROSINE-PROTEIN PHOSPHATASE RLPH2 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1622 Lele-ChrLele14 23849259 23849636 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1622 14 23849259 23849636 Lele05g1105 05 6885948 6893343 CCT
Lele14g1622 14 23849259 23849636 Lele06g0971 06 6003845 6006671 CCT
Lele14g1622 14 23849259 23849636 Lele07g1146 07 6921943 6929312 CCT
Lele14g1622 14 23849259 23849636 Lele08g0958 08 6049236 6056435 CCT
Lele14g1622 14 23849259 23849636 Lele15g0736 15 4260664 4262545 hybridization
Lele14g1622 14 23849259 23849636 Lele16g0742 16 4202395 4204115 hybridization