Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1619 ATGCTTTTCCCTTCCTCTCTTTTGTTGGATGAGAATGGTTTGGGTTTTATATGTCTGAGCCTTTTTTCTTTCATCTGCCATAAGTCTTTGGTCTCCGATTCATTGCATGTGAAATCAATCGGTATAGAATTGAACATTGAAGGTAAATCAAGTTATACAATTCACCTTGCAATGGGCTCATTCTCTGGCAGTTGTGAAATAGTTGAAGCAGAGGACGATCTAAATTCTGGTAAATCCGCAAGGATTTATCAGACAAATTCTGAATTTAGCATGGGTGAGAAAAATCAGAAGCTTCCAATGCTACAATTAGGATGCAAGGACAATCTGGAGAATGATATTAATAAGCTTTTCAAATCAGTTACCCTTAAGACTTCATTGAGGGATTCAGGGCTTTTACAAGATGTTACAAGCATTAAGATGAAAAATACCTTAAAAAAGCCAATAGCATTTGGTGTTTCTCGGTCTCCTCGAGTTGGTCCTTCTGAGCCTGCAACTCTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCTATGAAACGACTGTCAAAGTCAACGAATTCTCCCAGGGTATCTGAGGTTGGGAAGATCAAGGCCTTGTACAACTCAGTTTTAGGGGAAGGCAGTCAATATGAGTCATCCTCTGTTGAGAGTAAAGGGAGCGGAATTGAAATATCAGCGTCATCAGAAGAGAGAAAAACAGTCTCGTTGGACAACACGTACCAGTCTCATCAAGCTGCCAATGTCACTTCATCCTGTGCTACTGTTCAATCGTCTTCAAAAACTGTGATTGCAACTAAAGAAAACAATACAGCGTCTTCGTCAATGGAAATTGATTTGGTAAGTTCATCAAGTAAAATTGGGCTTCAATGTCAGCAATTAGTTTCTGTTCAAACAGGAAAACAAACATCTGCAGATTCTTCATCTCTTTCTAATACTGATGGAAGCAAAGTAGAGTTGCCTGAATGTGATTCTGTGCCCAAAAAAATAGGAAATAAAGCATCTGCATCAAAGGTTGGGCGAAAAGTCAGGTTGCAAGCAGTTTCTTCCTCATCAACATCTACTTCGTTAAGTGGAAATAGAGTAAGAGGAACCCACAATGCCCCCCGTACAGTCAAATCAGTCATAAGGAACAAGAATTTGAACAGGAAGAAACCCAAGCAGGATTCTGGTTCTGCTCCAAATGCTCCTACATCAAATGAAATGAATGATGGATTAGTTCCTGGAACAAATCCACTGTTTTGTGAGAGATGTCGATGCACTTTAGAGAGTACAAGTAAAGAAAAGAGCCAAGATAGTGTAGCATCGGACTGTGCCAATCCTGGAGATTCAGTAAGTTCAAGTAATGCCCATTACGGGGCAAATAAATCTGCTCCTACATCAACTAACTGTAATAGAAGCAAAGCTGTAGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAGGAGTGCAGTAGTGGTACGAGTACCAGTGATGAAAGCAACGTAAGTGGGGCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGCTGCCATTCGTCAAGCTCACATGCAGCATGGAGTCTTGGGCTTGAGGCAGTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGAACTGTATATCTTGCTGAACTAATTGGCACAAATTGCTTGTTTGCTATCAAGGTCATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATTTCTAGGGCTCAAACTGAAAGGGACATATTAAGGATTCTTGATCATCCTTTTCTACCCACACTCTACGCTCAATTCACATCAGATAATTTGTCATGTCTGATCATGGAATATTGTCCGGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCCTGGCAGAAGTTTTACCGAGCTAGCAGCTAGGTTTTATGTTGCTGAGGTCCTTCTTGCATTAGAGTACTTGCACATGCTTGGAATTGTTTACCGGGATTTGAAACCAGAAAACATTCTTGTTCGAGAAGATGGACACATAATGCTTACAGATTTTGACCTGTCCCTGAGGTGTGATGTCAGCCCAACGCTTCTGAAATCATCTTTTGATGCAGATCCAGAGAGGATTTCTGGTCCTTGCGCACGATCTAGTTGCATTGAGCCATTTTGCATTGAACCATCCTGTCAAGTTTCATGCTTCAGCCCTAGATTCTTACCTGCTGCTGCAAAAACAAAAAAATTAAAAGCCGATCTTACTGCACATATCAGATCGTTGCCACAGCTTGTGGCTGAGCCTACCGATGCAAGATCAAATTCTTTTGTTGGTACCCATGAATATTTGGCACCTGAGATCATCAAAGGAGAGGGACACGGCGCTGCGGTTGATTGGTGGACCTTTGGCGTTTTTCTCTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAACGAAGAAACATTAGCGAATGTGGTGTTGCAAAGTCTCAGATTTCCCGACAGTCCATTTGTTAGTTTCCAAGCCAGGGATCTCATAAGAGGGTTGCTGGTTAAAGAACCTGAAAACCGTTTGGGTTCAGAGAAAGGAGCTGCTGAGATTAAACAGCATCCCTTTTTCGAGGGCCTTAATTGGGCGTTAATTCGATGTGCTGTCCCACCAGAGCTTCCGGAGTTTTGTGATTTAGGAGTTCCAGACATGACCTCACTGGGCAAGTATTTTGAGTGTAAAGCAACGGGAGAACATGTGGAATTTGAGTTGTTTTGA 2784 0.4145 MLFPSSLLLDENGLGFICLSLFSFICHKSLVSDSLHVKSIGIELNIEGKSSYTIHLAMGSFSGSCEIVEAEDDLNSGKSARIYQTNSEFSMGEKNQKLPMLQLGCKDNLENDINKLFKSVTLKTSLRDSGLLQDVTSIKMKNTLKKPIAFGVSRSPRVGPSEPATLKQALRDLCISKASEMAAMKRLSKSTNSPRVSEVGKIKALYNSVLGEGSQYESSSVESKGSGIEISASSEERKTVSLDNTYQSHQAANVTSSCATVQSSSKTVIATKENNTASSSMEIDLVSSSSKIGLQCQQLVSVQTGKQTSADSSSLSNTDGSKVELPECDSVPKKIGNKASASKVGRKVRLQAVSSSSTSTSLSGNRVRGTHNAPRTVKSVIRNKNLNRKKPKQDSGSAPNAPTSNEMNDGLVPGTNPLFCERCRCTLESTSKEKSQDSVASDCANPGDSVSSSNAHYGANKSAPTSTNCNRSKAVAKVKKNGRLKEQLEFSQSSKSSQECSSGTSTSDESNVSGASFGNRPHMSKDVRWAAIRQAHMQHGVLGLRQFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKISRAQTERDILRILDHPFLPTLYAQFTSDNLSCLIMEYCPGGDLHVLRQKQPGRSFTELAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSFDADPERISGPCARSSCIEPFCIEPSCQVSCFSPRFLPAAAKTKKLKADLTAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAVPPELPEFCDLGVPDMTSLGKYFECKATGEHVEFELF 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1619 927 FunFam serine/threonine-protein kinase D6PK-like 631 698 - -
Lele14g1619 927 MobiDBLite consensus disorder prediction 349 381 - -
Lele14g1619 927 SUPERFAMILY Protein kinase-like (PK-like) 527 898 IPR011009 -
Lele14g1619 927 MobiDBLite consensus disorder prediction 306 413 - -
Lele14g1619 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Lele14g1619 927 PANTHER FLIPPASE KINASE 1-RELATED 287 898 - -
Lele14g1619 927 Pfam Protein kinase domain 776 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1619 927 Pfam Protein kinase domain 548 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1619 927 MobiDBLite consensus disorder prediction 392 411 - -
Lele14g1619 927 FunFam Serine/threonine-protein kinase D6PK-like 545 630 - -
Lele14g1619 927 Gene3D Phosphorylase Kinase; domain 1 547 630 - -
Lele14g1619 927 MobiDBLite consensus disorder prediction 434 519 - -
Lele14g1619 927 Gene3D Transferase(Phosphotransferase) domain 1 631 888 - -
Lele14g1619 927 MobiDBLite consensus disorder prediction 217 236 - -
Lele14g1619 927 MobiDBLite consensus disorder prediction 487 518 - -
Lele14g1619 927 SMART serkin_6 547 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1619 927 ProSiteProfiles Protein kinase domain profile. 547 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1619 927 FunFam serine/threonine-protein kinase D6PK-like 774 897 - -
Lele14g1619 927 MobiDBLite consensus disorder prediction 306 323 - -
Lele14g1619 927 CDD STKc_phototropin_like 545 897 - -
Lele14g1619 927 MobiDBLite consensus disorder prediction 434 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1619 Lele-ChrLele14 23833881 23838469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1619 58 927 AGC Kinase Gene Family AT3G52890 51.724 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele14g1619 Pkinase 1.3e-35 CL0016