Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1614 ATGTCCACACATGCACATATTGGGCCAGGATGTTATAGAGAGGACGTCAAGGTTTCTTTCATCGTGAAATTCATAATCCCTTTACCAAATTCAGAGACAAAGCAGGTCTGTGAGCGCGGATCCAGAACGAAGAACGATATGGCGGAAGAGCACCGATGCCAAGCTCCCGAAGGCCACCGACTCTGTGCTAATAACTGCGGCTTCTTCGGCAGCCCGGCCACCATGAATCTCTGTTCCAAGTGCTACGGGGATTTCCGTTTGAAGGAGCAACAAGAAGCCTCCAGCAAATCCAACATCGAAATCGCCCTCTCCTCCCCTGCTGCGCCGTCCTCAGGGTCATCTCTGTTGCCGGCAGTGGAGTCCCCCGCTCCTCCGCCGATGTTAACATTGCCAGAGGTTGCAGTAGATGCGTCGAGCTCGGCCGTCGCATCCCCCGGGCCGGAAGTGGCTACGGTGCAACCGAACCGATGCGCTACATGCCGGAAACGGGTCGGGCTGACGGGGTTCAAGTGCAAGTGCGGTGTCACGTTTTGTGGGACCCACAGGTATCCCGAGAAACACGGGTGTAGCTTCGATTTCAAGAAGGTGGGCCGAGAGGAAATAGCTCGGGCAAACCCTTTGATCAAGGCAAAGAAGCTCGAGACGATTTAA 651 0.5515 MSTHAHIGPGCYREDVKVSFIVKFIIPLPNSETKQVCERGSRTKNDMAEEHRCQAPEGHRLCANNCGFFGSPATMNLCSKCYGDFRLKEQQEASSKSNIEIALSSPAAPSSGSSLLPAVESPAPPPMLTLPEVAVDASSSAVASPGPEVATVQPNRCATCRKRVGLTGFKCKCGVTFCGTHRYPEKHGCSFDFKKVGREEIARANPLIKAKKLETI 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1614 216 FunFam Zinc finger AN1-type containing 6 133 212 - -
Lele14g1614 216 SUPERFAMILY AN1-like Zinc finger 145 211 IPR035896 -
Lele14g1614 216 ProSiteProfiles Zinc finger AN1-type profile. 151 197 IPR000058 GO:0008270
Lele14g1614 216 SMART A20_3 59 83 IPR002653 GO:0003677|GO:0008270
Lele14g1614 216 Pfam AN1-like Zinc finger 157 193 IPR000058 GO:0008270
Lele14g1614 216 Pfam A20-like zinc finger 60 82 IPR002653 GO:0003677|GO:0008270
Lele14g1614 216 Gene3D - 134 212 IPR035896 -
Lele14g1614 216 SMART AN1_Zf_4 157 194 IPR000058 GO:0008270
Lele14g1614 216 PANTHER AN1-TYPE ZINC FINGER PROTEIN 58 216 - -
Lele14g1614 216 ProSiteProfiles Zinc finger A20-type profile. 56 90 IPR002653 GO:0003677|GO:0008270
Lele14g1614 216 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 61 100 - -
Lele14g1614 216 Gene3D - 45 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1614 Lele-ChrLele14 23806368 23807882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1614 47 216 C2H2 Transcription Factor Family AT3G52800 57.803 1.16e-54 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0948 06 5831933 5835405 Lele14g1614 14 23806368 23807882 CCT
Lele07g1121 07 6764995 6768392 Lele14g1614 14 23806368 23807882 CCT
Lele08g0936 08 5879285 5882423 Lele14g1614 14 23806368 23807882 CCT
Lele14g1614 14 23806368 23807882 Lele15g0745 15 4305374 4305886 hybridization
Lele14g1614 14 23806368 23807882 Lele16g0751 16 4250515 4250943 hybridization