Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1575 ATGTCCATAAATCACTACTCATCGGACATTCCTGAGGCCACGCTGTGGTGGACTGAACAACATCACCGCCGTCGTCATCATCAAGGCTTCCTTATGCAGCCCATACAAGACCCCTCTCCTTCGACCTGGCCTTCGTATCTCTACCCTCCTCCGCCGCCAACCCGCTTCAACCTAAACCACGACGAGGATGAAGACGACGACGACGACAGTATTCAACACCAACGGTCCGGTCACGTGGAAAACGATGCGCCCACGTCGCAAGGAGGTTTGGGCGGCGAAGACGAGAAGGAAGGGATGTTCGAGAAGCCATTGACGCCGAGCGACGTGGGGAAGCTGAACCGGCTGGTGATTCCGAAACAGCACGCGGAGAAGTACTTCCCGTTGGGAGCGGGAGGGGAGGCGGCTGGAGAGAGCAAGGGCGTGTCGCTGAGTTTCGAGGATGAGGCAGGAAAGTGCTGGAGGTTCCGTTACTCGTACTGGAACAGCAGTCAGAGCTACGTGCTGACCAAAGGCTGGAGTCGTTACGTCAAGGACAAGCGTCTCGATGCTGGCGACGTCGTTTTCTTCCAGCGCCACCGTACCGACTCCAACCGCCTCTTCATCAACTGGAGGCGCCGCCACCAGCCTGGGTCCACCCCGGTGCACGTTAGCAGAGCAGTGCTCGTTCACAATACTCCCACCACCACCACCACTGAGGCCAACAGCAATATCAATATCAATAATAACAATGTTGGTGTGGGTGTGGGGTGGACCAGAAGTTTCTATGCTGCACATCCTTATCCTACTCATCATCATCATCAACCCTTGCCATACCAACCTGACTGTCTTCATGCAGGCGTAGGGTTTGAAGCGGAGCAGAATAAAACGACGACGTCGCCGGCGGGAAACAACTCCAGCTCGAGGATACTGAGGCTGTTCGGTGTAAACATGGCATGCCAGCCCGAAGAATCCGCATCCTCCGAACCCGAATACTCAAACCTGTCATCGACGTCGTCTCAGGGTACAGCCATCCAACACCACTTCGCCCATTACAGTCACCGATCTTCTTCTTATTCCGATCAGATGGTACGTCATCAACCACACTCCTAG 1089 0.5528 MSINHYSSDIPEATLWWTEQHHRRRHHQGFLMQPIQDPSPSTWPSYLYPPPPPTRFNLNHDEDEDDDDDSIQHQRSGHVENDAPTSQGGLGGEDEKEGMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGAGGEAAGESKGVSLSFEDEAGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVFFQRHRTDSNRLFINWRRRHQPGSTPVHVSRAVLVHNTPTTTTTEANSNININNNNVGVGVGWTRSFYAAHPYPTHHHHQPLPYQPDCLHAGVGFEAEQNKTTTSPAGNNSSSRILRLFGVNMACQPEESASSEPEYSNLSSTSSQGTAIQHHFAHYSHRSSSYSDQMVRHQPHS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1575 362 MobiDBLite consensus disorder prediction 313 335 - -
Lele14g1575 362 SMART B3_2 100 207 IPR003340 GO:0003677
Lele14g1575 362 Pfam B3 DNA binding domain 100 206 IPR003340 GO:0003677
Lele14g1575 362 MobiDBLite consensus disorder prediction 32 105 - -
Lele14g1575 362 ProSiteProfiles B3 DNA-binding domain profile. 100 207 IPR003340 GO:0003677
Lele14g1575 362 Gene3D - 94 215 IPR015300 -
Lele14g1575 362 SUPERFAMILY DNA-binding pseudobarrel domain 99 208 IPR015300 -
Lele14g1575 362 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 37 321 IPR044800 GO:0003700
Lele14g1575 362 CDD B3_DNA 99 197 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1575 Lele-ChrLele14 23632698 23634250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1575 93 316 RAV Transcription Factor Family AT5G06250 50.870 9.67e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele14g1575 B3 1.3e-29 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1575 14 23632698 23634250 Lele15g0778 15 4463896 4464899 hybridization
Lele14g1575 14 23632698 23634250 Lele16g0786 16 4415756 4418963 hybridization