Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1563 ATGAAGCTCATCCCCTCTCTTCTCAAAACCTTAGAACCAAGGTCCTCTTCTTCTTCCTCCTGGTCTTGGCCTCCTTGTCACCATCCTCGAACCCTCTCTTTCCGAGCTTCCTCCTCCGACTTCTTCAAAACCATCAACTCCGCCTACCTCGACCTCCCCGACAACGACGACTCAGCCGATCCAATCGAGACCATGATTCGCGGCGGTTTGAGATCATCGGATCGTTTGTTCTTCGAACCAGACCAAACCAGCTCCATATTAGAGGCTAAATCGTCGGCGACAACTTTGGCATTCAAAGACACCCTCGTACTGTCCATGGAATCCCAGGATCCCTTCGTGGATTTTCGCAAGTCCATGGAGGAGATGGTGGAGGCTCACGGCGTTAAAGACTGGGACAGTCTCGAGGAACTCTTGTGTTGGTATCTGAGGGTCAACGCTAAGAGCAATCACGGCTATATTATGGGTGCTTTCGTTGATTTATTGCTCGTTCTTTCTTTGTCTTCTGAATCTTCTTCCCTATCTTCTGCTTCTTCTCACTCTCCCTCTTCTCATCTCTCTTTGTATACTACTTCTTCTCCCTCTTCCTCTTTTACTACTCCTTGCGCTTCGTGTCTGGAAGTTGAGCAAGATGTTCAAGTGAAGCAGGGGAGTAAACGTGAAGACGAGGCCTCCTCATCTTCAACCGTTTGA 690 0.4899 MKLIPSLLKTLEPRSSSSSSWSWPPCHHPRTLSFRASSSDFFKTINSAYLDLPDNDDSADPIETMIRGGLRSSDRLFFEPDQTSSILEAKSSATTLAFKDTLVLSMESQDPFVDFRKSMEEMVEAHGVKDWDSLEELLCWYLRVNAKSNHGYIMGAFVDLLLVLSLSSESSSLSSASSHSPSSHLSLYTTSSPSSSFTTPCASCLEVEQDVQVKQGSKREDEASSSSTV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1563 229 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 104 165 IPR006458 -
Lele14g1563 229 MobiDBLite consensus disorder prediction 173 200 - -
Lele14g1563 229 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 164 IPR038933 GO:0045892
Lele14g1563 229 Pfam Transcriptional repressor, ovate 108 164 IPR006458 -
Lele14g1563 229 ProSiteProfiles OVATE domain profile. 104 163 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1563 Lele-ChrLele14 23567115 23567804 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele14g1563 Ovate 2.5e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1031 05 6406548 6408196 Lele14g1563 14 23567115 23567804 CCT
Lele14g1563 14 23567115 23567804 Lele15g0787 15 4525468 4526148 hybridization
Lele14g1563 14 23567115 23567804 Lele16g0800 16 4489325 4489828 hybridization