Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1562 ATGTCTCACCCCAGAAAGAAGCTTCATTTAAGCTCTGTTTCCGTCAAACTAGGCTGCGGCAGCTGCAGTAGACCCAAGCTTTCTCATATTTTCCACCCAAAGCCTAAACCCAAGAACCCCTCTTACCATAAACACAAACTTTACAATCTTCCTTCTTCCAGCCACTACGACTCCGCCACCACCACCACCACCACAACTTTCTCTCCCTACGTCGACTCCTCGCAGTTTTCTGACTCTGATAACTATGGGAATGCGTCGAGGACGCTCGGAGCTTTCGGCAGAGGAGGCGGCGAAGGCGTGGCGGTGGAGAAAGATTCCGACGACCCTTATCTGGATTTTAGGCACTCCATGCTTCAAATGATATTGGAGAATGAGATATACTCCAAGGACGACCTTCGGGAGCTTCTCAATTGTTTTCTTCAGCTCAATTCTCCCTACCACCATGGAGCTATAGTCAGAGCTTTCACTGAGATCTGGAATGGCGTGTTCTCAGTGAAGACGAGTTCCCCCAGATTTCACTTCAGTCGCAAGTCACGTGACTTCTGA 546 0.4927 MSHPRKKLHLSSVSVKLGCGSCSRPKLSHIFHPKPKPKNPSYHKHKLYNLPSSSHYDSATTTTTTTFSPYVDSSQFSDSDNYGNASRTLGAFGRGGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGAIVRAFTEIWNGVFSVKTSSPRFHFSRKSRDF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1562 181 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Lele14g1562 181 Pfam Transcriptional repressor, ovate 106 162 IPR006458 -
Lele14g1562 181 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Lele14g1562 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 57 164 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1562 Lele-ChrLele14 23560701 23561246 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele14g1562 Ovate 1.2e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1562 14 23560701 23561246 Lele15g0788 15 4532252 4534379 hybridization
Lele14g1562 14 23560701 23561246 Lele16g0801 16 4496317 4496868 hybridization