Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1540 ATGGATCACGAGATTGATGTCCCTCCCTTCTTTATCTGCCCCGTTTCGTTAGAAATCATGAAGGATCCGGTGACTTTGTCCACCGGTATTACCTACGATCGTGAGAGTATTGAGAAATGGCTGTTCTCCTGGAAGAACATAACCTGCCCAGTTACAAAACAACCCATATCAGACGACGCCGATCTCACCCCCAACCATACCCTTCGCCGATTGATTCAGGCCTGGTGTACCATGAACGCTTCTTACGGCATCGAAAGGATCCCCACGCCTAAGCCTCCGGTCACCAAAACCCTGATCGCCAAGCTCATCAGAGACGCTTCCCCATCACCTTACAACCTGACTCGATGTCTCCGAGAGCTCAAATCCATCGCTTCTGACAGCGAAACAAATAGACGCTGCATGGAAGGTTCGGGTGCCGTTGAGTTCTTAGCATCTATTATATCCGCAGCCTCACCCCAAGTGGAGCCTAACCAAGACGAGCTGGCCTTAAGTATCCTCCACAGCCTCCACGTGTCCGAAGCTAGCTTAAAATCTCTCATGGCCTTCAGAAATGGAGAGCTCATAAATTCCTTAGCCACGGTCATGCAGAAAGGAAGCGGAGCTGTTGAGGCACGGGGCAGGGTTAGCCGTCGTGTCGAAGAAGATTCTAAGGGTTTCGACGTTGGCGAACGAGAAGGCGGTGAGAATTTTGCTGTCTGTTTCCAAGTTCTCGGCGACTGCAAGTGTTGTGCAGGAAATGATACAAGTGGGTGTGATGGCGAAGCTATGTTTGGTGATGCAAATGGAGAGTGGAAGCAAGACGAAGGAGAAAGCGAGAGAGATCCTCAAACTGCACGCTCACGCATGCAAGAACTCTTCATGCATGCCCAGCAGTTTGGGTTCCTACTTAGCTTGATCACCGAGCAGATTTGGATTGCTTCTCTTGATTTTGTTTCAAGTCGTTGA 945 0.5005 MDHEIDVPPFFICPVSLEIMKDPVTLSTGITYDRESIEKWLFSWKNITCPVTKQPISDDADLTPNHTLRRLIQAWCTMNASYGIERIPTPKPPVTKTLIAKLIRDASPSPYNLTRCLRELKSIASDSETNRRCMEGSGAVEFLASIISAASPQVEPNQDELALSILHSLHVSEASLKSLMAFRNGELINSLATVMQKGSGAVEARGRVSRRVEEDSKGFDVGEREGGENFAVCFQVLGDCKCCAGNDTSGCDGEAMFGDANGEWKQDEGESERDPQTARSRMQELFMHAQQFGFLLSLITEQIWIASLDFVSSR 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1540 314 SMART Ubox_2 10 75 IPR003613 GO:0004842|GO:0016567
Lele14g1540 314 FunFam RING-type E3 ubiquitin transferase 1 85 - -
Lele14g1540 314 PANTHER WDSAM1 PROTEIN 3 210 IPR045185 GO:0061630
Lele14g1540 314 SUPERFAMILY RING/U-box 4 82 - -
Lele14g1540 314 Pfam U-box domain 7 79 IPR003613 GO:0004842|GO:0016567
Lele14g1540 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 85 IPR013083 -
Lele14g1540 314 CDD RING-Ubox_PUB 11 54 IPR045210 -
Lele14g1540 314 ProSiteProfiles U-box domain profile. 6 82 IPR003613 GO:0004842|GO:0016567
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele14g1540 Lele-ChrLele14 23435082 23436346 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1540 1 198 U-box Gene Family AT2G35930 56.281 2.09e-73 230