Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1535 ATGAACGACTTGTTGAGCTCCTCCTTCTCCCGCTCCGCCGGAGACAACCACCATGTCATCCAGATGACGGAGCTGACGGACGGCGCCAACCTCGACAAGTTCTTCGAGGAAGTGGATTCCCTCAAGAAGGAGCTCAACGAGCTGGAGCGCCTCAACCAATCCCTCCGAAGCTCCCATGAGCAGAGCAAGACTCTTCACAACGCTAAGGCCGTCAAGGACCTTCGCTCTCGCATGGAGTCCGACGTCGCCCTCGCCCTCAAGAAAGCCAAGCTCATCAAGCTTCGCCTCGAGGCACTCGACCACTCCAACGAAGATAACCGCAAGCTGCCCGGTTGCGGACCTGGCTCGTCTTCCGACCGGACTCGAACTTCCGTTGTCAACGCCTTGAGAAAGAAGCTCAAGGACTCCATGGAGAGCTTCAACAACCTCAGGCAACAAATTTCCACCGAGTACAGAGACACCGTACGACGTAGGTACTACACGGTCACCGGCGAGAATCCCGACGACAAAACCGTCGACCTCCTCGTCTCTACTGGGGAGAGTGAAAGTTTTCTGCAGAAAGCGATTCAGCAGCAAGGGAGAGCGAGCGTGTTGGACACGATCCATGAGATTCAAGAGAGGCACGACGCGGTGAAAGAGATAGAGAGAAATCTGAATGAGCTGCACCAGGTGTTCTTGGACATGGCAGTACTGGTCCAAACCCAGGGGGAGCAGTTGGATGATATAGAGAGCCACGTGGCAAGAGCTGACTCGTACGTGAGAGGCGGGGTGCAGCGGTTGCATGTGGCGAGGAAGCACCAGAAGAACACCCGGAAATGGACTTGCATTGCCATCATACTGCTCCTCATTATTATATTGATTATAGTTCTACCCATTGTGTTAAGAAAGTGA 891 0.5421 MNDLLSSSFSRSAGDNHHVIQMTELTDGANLDKFFEEVDSLKKELNELERLNQSLRSSHEQSKTLHNAKAVKDLRSRMESDVALALKKAKLIKLRLEALDHSNEDNRKLPGCGPGSSSDRTRTSVVNALRKKLKDSMESFNNLRQQISTEYRDTVRRRYYTVTGENPDDKTVDLLVSTGESESFLQKAIQQQGRASVLDTIHEIQERHDAVKEIERNLNELHQVFLDMAVLVQTQGEQLDDIESHVARADSYVRGGVQRLHVARKHQKNTRKWTCIAIILLLIIILIIVLPIVLRK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1535 296 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 28 158 - -
Lele14g1535 296 Gene3D - 28 161 - -
Lele14g1535 296 SUPERFAMILY t-snare proteins 29 256 IPR010989 GO:0016020|GO:0016192
Lele14g1535 296 MobiDBLite consensus disorder prediction 104 123 - -
Lele14g1535 296 Coils Coil 126 146 - -
Lele14g1535 296 Pfam SNARE domain 237 289 IPR000727 -
Lele14g1535 296 ProSitePatterns Syntaxin / epimorphin family signature. 207 246 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele14g1535 296 Coils Coil 31 65 - -
Lele14g1535 296 Pfam Syntaxin 33 236 IPR006011 GO:0016020
Lele14g1535 296 Gene3D - 189 294 - -
Lele14g1535 296 CDD SNARE_syntaxin1-like 200 260 - -
Lele14g1535 296 PANTHER SYNTAXIN 48 285 IPR045242 -
Lele14g1535 296 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 201 263 IPR000727 -
Lele14g1535 296 CDD SynN 31 188 IPR006011 GO:0016020
Lele14g1535 296 FunFam Syntaxin 132 194 294 - -
Lele14g1535 296 SMART tSNARE_6 196 263 IPR000727 -
Lele14g1535 296 SMART SynN_4 26 152 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1535 Lele-ChrLele14 23404837 23405922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1535 26 275 SNARE and Associated Proteins AT3G11820 74.800 1.76e-140 397