Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1523 ATGACAACTAGGGAGGAGAAGGAGATATTGAATGGGATCACTGGTTGCGTCAATCCGGGAGAAGTTCTGGCTTTGATGGGTCCTTCTGGAAGCGGAAAGACGACTCTCCTCAATCTTCTTGGAGGCAGGCTAAGTCAGCCCACTGTAAGTGGTTCCATCACTTACAATGACCAACCATATTCCAAGTTCTTGAAGAGCAGGATAGGATTCGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACACTGACATATGCAGCACTCCTGAGACTGCCGAAGACAACCACGAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCATGAGCTTGGCTTGGATAGGTGCCAAGACACTATGATAGGCGGTTCTTTTGTCCGCGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCTTAATCAACCCTTCTCTATTGTTTCTTGACGAACCAACTTCTGGTTTGGATTCTACGACAGCCTTGAGAACTGTTCAGATTCTACAAAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAAATTCGATAAGTTGATCCTTCTAGGCAAAGGCAGCTTGCTTTACTTTGGGAAAGCATCAGAAGCAATGCTTTACTTCCAATCTATAGGATGTTCTCCTCTTATTGACATGAACCCAGCCGAGTTTTTGCTAGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGATGATAAAGTACAGATGGGAAATGCAGCAACTGAAACTCGGAATGGGAAACCACCACCTGCACTTGTACACGAGTATCTGGTGGAGGCCTATGATGAGACTGGAGCTGCAGAGACAGCGAAGAAAAGGCTAATGGAACGTATCCCGCTTGATGAAGAAGTAACTAAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGAGCTGGTGTGAGCAATATTCCATACTGTTCTGGAGGGGAATTAAAGAGCGGAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATCATCTTAGGACTACTTTGGTGGCAATCGGATGCCACCACAACAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTTTTTTGGGGATTCTTTCCGGTGTTCACTGCAATATTTACCTTTCCTCAAGAGAGAGCTATGCTGAGCAAGGAACGTGCAGCTGATATGTATAGACTAAGTGCATACTTCTTAGCTAGGACTACGAGTGACCTTCCCTTGGATTTGATATTACCGGTGCTTTTCCTTCTTGTTGTTTATTTCATGGCTGGTTTGAGAGTGAGTGCAGCTCCCTTTTTCCTCAGCATTCTCATTGTTTTCCTCTGCATCGTGGCAGCTCAGGGACTTGGACTTGCCATTGGAGCTACACTAATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTTACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAAAGTCCCAGTATTTATATCTTGGATTCGGTACATGTCATTCAACTACCACACATATAAACTTCTATTGAAGGTGCAATATGAGCATATAACACCAAGCATAAATGGGATGAGAATTGACAGTGGTTGGACGGAGGTGGGTGCTCTGATAGCCATGGTTTTCGGTTATCGTTTCTTGGCTTACCTTTCTTTGCGACGGATGAAACTACAGTAA 1743 0.4435 MTTREEKEILNGITGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPTVSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIHELGLDRCQDTMIGGSFVRGVSGGERKRVCIGNEILINPSLLFLDEPTSGLDSTTALRTVQILQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMLYFQSIGCSPLIDMNPAEFLLDLANGNINDVSVPSELDDKVQMGNAATETRNGKPPPALVHEYLVEAYDETGAAETAKKRLMERIPLDEEVTKVSSPKRQWGASWCEQYSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDATTTKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRVSAAPFFLSILIVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPVFISWIRYMSFNYHTYKLLLKVQYEHITPSINGMRIDSGWTEVGALIAMVFGYRFLAYLSLRRMKLQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1523 580 Pfam ABC transporter 10 161 IPR003439 GO:0005524
Lele14g1523 580 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 571 - -
Lele14g1523 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 222 IPR027417 -
Lele14g1523 580 SMART AAA_5 19 210 IPR003593 -
Lele14g1523 580 ProSitePatterns ABC transporters family signature. 133 147 IPR017871 GO:0005524|GO:0016887
Lele14g1523 580 Pfam ABC-2 type transporter 190 250 IPR043926 GO:0140359
Lele14g1523 580 Gene3D - 2 226 IPR027417 -
Lele14g1523 580 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 233 IPR003439 GO:0005524
Lele14g1523 580 FunFam ABC transporter G family member 22 1 227 - -
Lele14g1523 580 Pfam ABC-2 type transporter 328 537 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1523 Lele-ChrLele14 23340102 23342697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1523 3 277 Calmodulin-binding Proteins AT2G36910 28.470 9.61e-18 85.5