Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1520 ATGGGCAACGTCTGTGTGGGACCTAGCCTTGGTGGGAATGGGTTCTTCCAATCGATCACATCCGCTTTCAAGAAAACCCCGCCGCCGGAGGGCAGGCTTCCGGCGCCTAACGGCGACAAGGACAATAAAAGCACGGAAAATGCTGGGCCTGATTCATTTAAAGATTCCGACGATCCAAAGCAAGTTCAAATTACACCACCTGAATTGGTGAAAATTCCCAGTGATGAAAAGCTGCCGCCACCAGAACCCGAAAAGCCTGCTAAACCAGAGGTCAATGAACATACAGGTAGTACTTCTGGTGCAGGGAAAGATGAGAAGCCCGCTAAGCCGGAGGTTGTCAATGATGAGAAGCCCGCTAAGCCGGAGGTGGTCAATGGTGAGAAGCCTGCTAAGCCGGAGGTGGTTGTCAATGAAGAGACCCCTGCTAGGCCGGAGGTGGTGGTCAATGACCCTGCTCCTAAGGAACCTGAAAAGCCTGTTAAGCCGGAGGTGGTCAACGAAGCTTCGTCTAACAATACCGCTAATGCTGGTGAAGCTACGAAACCTACTCATGTTAAAAGGGCATCGAGCATGGGACTTCGAATAGATTCGGTTTTGGGGAAGAAAAATGAGAATATAAAGGATTTTTATAGTCTGGGGCGGAAGCTTGGACAAGGGCAGTTTGGGACAACATACTACTGTCTGGAAAAGACCACTGGCAGAGAATTTGCTTGTAAATCCATTCTTAAGAGAAAATTGAACACACAAGAGGATATAGAAGATGTAAGAAGGGAAATTCAGATAATGCACCACTTGTCTGGTCATCCCAATGTGATTCGGATAATTGGTGCTTATGAGGATGCTGTAGCTGTTCATGTCGTTATGGAACTCTGTGCTGGTGGAGAGCTTTTTGACAGGATCATACAGAGAGGGCATTACACTGAGAAAAAGGCAGCCGAACTTGCAAGGGTAATTGTTGGTGTCGTAGAGGCATTCCATTCTATGGGGGTCATGCATCGAGACTTGAAGCCAGAGAACTTTCTCTTCGTCGGCCAAGAGGAAGAGTCACAGCTTAAGACAATAGATTTCGGGCTCTCGGTGTTCTTTAGACCAGGTGAAACATTTACCGATGTGGTTGGGAGCCCCTATTATGTGGCCCCTGAAGTTTTGCGGAAACTTTATGGTAAAGAATGTGACGTCTGGAGTGCAGGCGTGATCATTTATATCTTACTGAGTGGAGTTCCCCCATTTTGGGACGTTTGTCGTTACATGTCAGTTCCTGATGTTCCTTATTTTGGATCAGAAACGGAGCTAGGCATATTTGACCAAGTTTTAAAAGGAGAACTTGACCTTGTCTCTGAGCCATGGCCTAGCATATCTGCAAGTGCAAAGGATCTTCTTCGAAGAATGCTTGTAAGAGATCCTAAGAAGCGCCTATCGGCACGTGAAGTTCTTAGCCATCCTTGGTTCCAGACCGAAGGTTTTGCTCATGATAAACCTCTTGATTCTGTTGTTTTGACTCGTTTGAAGCAATTTTCTGCCAGGAACAAGTTTAAAAAGATGGCGATCCGAGTAATTGCTGAAAGTCTGTCGGAGGATGAAATTGCTGGGTTGAAAGAAATGTTCAAGGTGATAGACACGGATAATAGTGGACACATCACTCGTGAGGAACTGAAAGTTGGTTTGGAGAGAGTGGGTGCTTTCCTCAAGGATTCTGAAATTGATCGGCTAATGCAATCGGCAGACACGGATAACAGCGGTACATTAGACTATGGTGAATTCATAACAGCCATGATTCATGAAAACAAGGTCCAACAGGAGGATCATCTGTATGCCGCCTTCTCCTATTTTGACAAAGATAATAGTGGCTACATTACGCGAGATGAGCTCCAGCAAGCGTGTCAAAAGTTTGGTCTGGAAGATGTTCAATTAGATGATATAATCCGCGAAGTTGACCGGGATAATGATGGGCGCATTGATTATAACGAGTTTGTTGCAATGATGCAAGAATCTGAAAAGGGCCTATGGAATAGCTTGAGTAGAGCTGCGGATGTCGTCGAGCATTAA 2046 0.4585 MGNVCVGPSLGGNGFFQSITSAFKKTPPPEGRLPAPNGDKDNKSTENAGPDSFKDSDDPKQVQITPPELVKIPSDEKLPPPEPEKPAKPEVNEHTGSTSGAGKDEKPAKPEVVNDEKPAKPEVVNGEKPAKPEVVVNEETPARPEVVVNDPAPKEPEKPVKPEVVNEASSNNTANAGEATKPTHVKRASSMGLRIDSVLGKKNENIKDFYSLGRKLGQGQFGTTYYCLEKTTGREFACKSILKRKLNTQEDIEDVRREIQIMHHLSGHPNVIRIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTEKKAAELARVIVGVVEAFHSMGVMHRDLKPENFLFVGQEEESQLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKLYGKECDVWSAGVIIYILLSGVPPFWDVCRYMSVPDVPYFGSETELGIFDQVLKGELDLVSEPWPSISASAKDLLRRMLVRDPKKRLSAREVLSHPWFQTEGFAHDKPLDSVVLTRLKQFSARNKFKKMAIRVIAESLSEDEIAGLKEMFKVIDTDNSGHITREELKVGLERVGAFLKDSEIDRLMQSADTDNSGTLDYGEFITAMIHENKVQQEDHLYAAFSYFDKDNSGYITRDELQQACQKFGLEDVQLDDIIREVDRDNDGRIDYNEFVAMMQESEKGLWNSLSRAADVVEH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1520 681 ProSitePatterns EF-hand calcium-binding domain. 611 623 IPR018247 -
Lele14g1520 681 SUPERFAMILY EF-hand 523 662 IPR011992 -
Lele14g1520 681 MobiDBLite consensus disorder prediction 75 91 - -
Lele14g1520 681 ProSitePatterns EF-hand calcium-binding domain. 645 657 IPR018247 -
Lele14g1520 681 ProSiteProfiles Protein kinase domain profile. 210 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1520 681 ProSiteProfiles EF-hand calcium-binding domain profile. 598 633 IPR002048 GO:0005509
Lele14g1520 681 Pfam EF-hand domain pair 531 591 IPR002048 GO:0005509
Lele14g1520 681 Pfam EF-hand domain pair 601 662 IPR002048 GO:0005509
Lele14g1520 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Lele14g1520 681 SUPERFAMILY Protein kinase-like (PK-like) 208 494 IPR011009 -
Lele14g1520 681 SMART serkin_6 210 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1520 681 PANTHER SERINE/THREONINE-PROTEIN KINASE 201 657 - -
Lele14g1520 681 MobiDBLite consensus disorder prediction 36 58 - -
Lele14g1520 681 MobiDBLite consensus disorder prediction 165 179 - -
Lele14g1520 681 ProSiteProfiles EF-hand calcium-binding domain profile. 562 597 IPR002048 GO:0005509
Lele14g1520 681 Gene3D - 508 666 - -
Lele14g1520 681 ProSitePatterns EF-hand calcium-binding domain. 575 587 IPR018247 -
Lele14g1520 681 SMART efh_1 530 558 IPR002048 GO:0005509
Lele14g1520 681 SMART efh_1 636 664 IPR002048 GO:0005509
Lele14g1520 681 SMART efh_1 602 630 IPR002048 GO:0005509
Lele14g1520 681 SMART efh_1 566 594 IPR002048 GO:0005509
Lele14g1520 681 FunFam Calcium-dependent protein kinase 1 491 665 - -
Lele14g1520 681 Gene3D Transferase(Phosphotransferase) domain 1 296 507 - -
Lele14g1520 681 ProSiteProfiles EF-hand calcium-binding domain profile. 526 561 IPR002048 GO:0005509
Lele14g1520 681 FunFam Calcium-dependent protein kinase 1 212 295 - -
Lele14g1520 681 MobiDBLite consensus disorder prediction 1 187 - -
Lele14g1520 681 CDD STKc_CAMK 209 482 - -
Lele14g1520 681 Pfam Protein kinase domain 210 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1520 681 ProSitePatterns EF-hand calcium-binding domain. 539 551 IPR018247 -
Lele14g1520 681 CDD EFh 605 662 IPR002048 GO:0005509
Lele14g1520 681 CDD EFh 531 591 IPR002048 GO:0005509
Lele14g1520 681 MobiDBLite consensus disorder prediction 104 127 - -
Lele14g1520 681 FunFam Maternal embryonic leucine zipper kinase 200 493 - -
Lele14g1520 681 ProSiteProfiles EF-hand calcium-binding domain profile. 636 667 IPR002048 GO:0005509
Lele14g1520 681 Gene3D Phosphorylase Kinase; domain 1 212 295 - -
Lele14g1520 681 ProSitePatterns Protein kinases ATP-binding region signature. 216 243 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1520 Lele-ChrLele14 23324842 23328440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1520 1 673 EF-hand Containing Proteins AT3G10660 60.844 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele14g1520 Pkinase 1.4e-70 CL0016