Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1518 ATGCTTAGCTTGAATGGCTTCTTGTCCTGTACAAGAAGGATCAAGAAAAAGAACAGAAACAAGCGCAAACTCAAAAGCCAATTCGCTTTCCATAAGCAAAAGGGCATTTCCCATGAGAATGAATTGCTAGACCGAGATGAAGTGATAGAAGATAGTCAAGATACTGAAGGTTTCAGGCTCAAAACCTACGCTCGATCACACACTTATTGGGTTCAACCTTTGGGAAATCTTTATTTCAACCCAGGTTCTATCAACTGCAGAGCTACAGGTTTAGGTAATCTGCACGCTCTGACAGACGAGCTTGTTCTTGAAATTCTGGGGTTGTTGAGTGGGAAAGATTTGGGGGTTTTAGCTACTGTTAGTAAATCGTTTCATGTTTTCACCAATCATGAACCCATTTGGAGGAATCTTGTATTGGAAAATCTGAATGGTGGCTTTCGGTACAATGGGTCTTGGAAATCTACTTATATTGGTGCTTACTACCCTTCATTTGATGTATCAAATATTGCCATTCTGAATTTCAAAGTGAGAGACTTTTATTCTGATTATCTCTTTCAAAGTTGGCTCTGTGCTAATCTTGAAATGAAACCAGAATGGCTGGTAAGAGATAATATAGTTCGAAAAAGGGGCATTTCGGTTGAAGAATTCGTCAAGAATTTTGAGGAGCCTAATAAGCCGGTCTTGTTGGAAGGATGTCTTGATAATTGGGATGCACTGAAAAAATGGGATAGAGATTATTTGGCGCAGTTGTGTGGCGGTGTTAAGTTTTCAGTTGGCCCAGTAGAGATGAGGCTTGAAGACTATTTTGAGTATTCAGATCAAGTGAGAGAAGAAAGACCATTGTACCTGTTTGATCCGAAGTTTGCTGAAAAAGTGCCAGATTTGGATTCCCAATTTGACGTTCCGGCTTACTTCCAAGAGGACTTGTTTAGTGTCTTGGGCAAAGAGAGACCAGACTACAGGTGGATTATTGTTGGTCCCACTGGATCAGGATCATCTTTCCATGTTGATCCAAATTCGACTTCAGCTTGGAATGCTGTAATCAAGGGCTCCAAGAAGTGGATATTATTTCCTCCTGATGTGATTCCACCTGGAGTTCATCCTAGTCCTGATGGTGCAGAGGTTGCATCTCCTGTTTCAATAATTGAGTGGTTTATGAACTTTTATGGCGCGACAAAAAGTTGGAAAAAGAAGCCTGTTGAGTGCATCTGTAAAGCTGGGGAGGTTGTCTTTGTGCCTAATGGATGGTGGCATTTGGTGATCAACTTGGAGGAGTCCATAGCTATAACCCAAAATTATGTCAGTAGGAGAAACTTGCTTAATGTCTTGGATTTTCTTAAAAGGCCGAATGCATGCGTGCTAGTATCTGGAACAAGAGATCGAGTGAATTTGTATGATAAGTTTAGAGATGCTATAGAGGATTCTTTTCCTGGAATAATTGATGAGCTGACTCGGAAAGAGGAAGAGAAACAGATTCAGCAGAAGAAAAGTTCTTTCTGGGATTCTGTCACTGATTCTAAAGTGGGAGCTTTTAAATTCTCTTTCTAG 1548 0.4057 MLSLNGFLSCTRRIKKKNRNKRKLKSQFAFHKQKGISHENELLDRDEVIEDSQDTEGFRLKTYARSHTYWVQPLGNLYFNPGSINCRATGLGNLHALTDELVLEILGLLSGKDLGVLATVSKSFHVFTNHEPIWRNLVLENLNGGFRYNGSWKSTYIGAYYPSFDVSNIAILNFKVRDFYSDYLFQSWLCANLEMKPEWLVRDNIVRKRGISVEEFVKNFEEPNKPVLLEGCLDNWDALKKWDRDYLAQLCGGVKFSVGPVEMRLEDYFEYSDQVREERPLYLFDPKFAEKVPDLDSQFDVPAYFQEDLFSVLGKERPDYRWIIVGPTGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIIEWFMNFYGATKSWKKKPVECICKAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNACVLVSGTRDRVNLYDKFRDAIEDSFPGIIDELTRKEEEKQIQQKKSSFWDSVTDSKVGAFKFSF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1518 515 Coils Coil 14 34 - -
Lele14g1518 515 Gene3D Cupin 185 435 - -
Lele14g1518 515 SUPERFAMILY Clavaminate synthase-like 205 448 - -
Lele14g1518 515 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 91 513 - -
Lele14g1518 515 SMART cupin_9 281 450 IPR003347 -
Lele14g1518 515 Pfam Cupin-like domain 214 433 IPR041667 -
Lele14g1518 515 SUPERFAMILY F-box domain 89 158 IPR036047 GO:0005515
Lele14g1518 515 Gene3D - 89 162 - -
Lele14g1518 515 SMART fbox_2 97 137 IPR001810 GO:0005515
Lele14g1518 515 FunFam F-box protein At1g78280 185 435 - -
Lele14g1518 515 ProSiteProfiles F-box domain profile. 91 137 IPR001810 GO:0005515
Lele14g1518 515 ProSiteProfiles JmjC domain profile. 290 450 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1518 Lele-ChrLele14 23311062 23313195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1518 82 439 Glycosyltransferase AT1G78280 38.753 1.82e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele14g1518 Cupin_8 1.8e-24 CL0029