Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1517 ATGGATTCGGATGCAGTTCCATTTTCCAGCCAATCGGTAAAATGCTGCGACTGTGGGTGTAGATGTTCTTTGGTGGCTGAATCCGCGGGGGCTTGGATTCGTTCCGTTAAACGGAAGCATGATGAGTTTGAACGGGGTAACCAATTGTTTCTACCGGCCTTGAATTACTTCTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCTGCATTGCGCGAGATAGTTAGCAGACAACAAAAAAATATACAAGATTTATACGCTGAGTTGGAGGAGGAGAGAAATGCTTCATCAACAGCTGCAAATGAGGCCATGTCAATGATATTAAGGTTGCAGAGGGAGAAGGCAGAGATTCAAATGGAAGCCCGGCAGTTCAAGTCTTTTGTGGAGGAGAAGATGTTGCATGATCGGGAGGAAGTTCTAGCATTTGAGGATTTGTTGTATAAAAGAGAACAAGCAATCGAGTCACTTACTTGTGAGGTGCAGGCTTATAAGCATAGGATGATGAGCTATGGGCTAACTGAGTCGGAAGCAGATGGTAGGAGCCTGTATATGGATGATTTTGACCCTGAATATGAACCTTCCATCCGTGAATACCCTCCATTGAAGTGCAATGTAAATGAAATGCATGCTGCGAGGGATGTTGATGACGTAGATGTTGAGAAATATGCATTTGGCGAAACCCCTCGTGATAGGTTGAGGAATTTGGAAAATAGGATCTCTCAAATGGAAAGAAATCCCACTTATAGCCAGGTGGATGGGGATATTTCAGGAAAAAATATTCTAGAGAAGGTGATAGTTGGGCAGTCTCCTCGTCCAAGTAAACATTCAAGGAAATTTTCTGGTGACTCTAGTACATTTGCTGGTATGGGTAGAGAGATGAGACCTGAATCTTTTGTGGATTCTCCAAAACTTAGTACTTCCTTTCGGAAGATAGATCATATCTCACTGCCAGAGGATCCATCCAACTTGAAAAAGGTAGATAATGCATCAGAAGCTGGTGATGACACCACTGACAGAGTTTATACCATTGACTCTATTCATAATGGCCCCCCATCCAATGGTTTTAAAGAGTCCAAACCTGTTTCTGGTGTTTATGAGGATTATTCAACCACTCCAAGGGTAGATAATGTTTTTGGATATGAAGACCCTGATGACATTAAAAGGCTATACATGCGGCTTCAGGCACTTGAGGCTGATAGGGAATCGATGAAGCAGACAATCATTTCAATGAGTACTGATAAAGCACAGACTGTGTTATTGAGGGAAATTGCTCAACATTTGTGCAAAGAGATGTCACCCCAAAGAAAATTGGCAGTGAATAGGCCATCTGTTGGCAGATTTTCGTCACTTATTAAGGCAATCACAGGCGCTTTTTCCTGGAGGAAGAAAGCACGCCAATGCAAGTATACGTTGGGGCCATCAGCCAACGGCGTGGGCTTGCAAACGCTTCTGGATAATGGGCCTCGTGTAAGGCAATGGAGATGTCTTTCGAGCGCACAACTCAGAGTTTAG 1512 0.4352 MDSDAVPFSSQSVKCCDCGCRCSLVAESAGAWIRSVKRKHDEFERGNQLFLPALNYFSVARVQIENECAALREIVSRQQKNIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKSFVEEKMLHDREEVLAFEDLLYKREQAIESLTCEVQAYKHRMMSYGLTESEADGRSLYMDDFDPEYEPSIREYPPLKCNVNEMHAARDVDDVDVEKYAFGETPRDRLRNLENRISQMERNPTYSQVDGDISGKNILEKVIVGQSPRPSKHSRKFSGDSSTFAGMGREMRPESFVDSPKLSTSFRKIDHISLPEDPSNLKKVDNASEAGDDTTDRVYTIDSIHNGPPSNGFKESKPVSGVYEDYSTTPRVDNVFGYEDPDDIKRLYMRLQALEADRESMKQTIISMSTDKAQTVLLREIAQHLCKEMSPQRKLAVNRPSVGRFSSLIKAITGAFSWRKKARQCKYTLGPSANGVGLQTLLDNGPRVRQWRCLSSAQLRV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1517 503 MobiDBLite consensus disorder prediction 268 289 - -
Lele14g1517 503 Pfam Zein-binding 70 160 IPR007656 -
Lele14g1517 503 PANTHER BNAANNG28530D PROTEIN 64 444 - -
Lele14g1517 503 Coils Coil 61 120 - -
Lele14g1517 503 Coils Coil 386 406 - -
Lele14g1517 503 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1517 Lele-ChrLele14 23306082 23309403 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0980 05 6059887 6062170 Lele14g1517 14 23306082 23309403 CCT
Lele14g1517 14 23306082 23309403 Lele15g0832 15 4814094 4819539 hybridization
Lele14g1517 14 23306082 23309403 Lele16g0850 16 4759737 4762645 hybridization