Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1510 ATGGCAGCTGCGGTGGCAATTCCTCCTGAAGCTACCACGAGTATAGACCCGACACAGATCGAGGTGAAGCTCTTTAACAGGTGGACCTTCGATGACGTTCAGGTTAATGATATCTCTTTGGCTGATTATATTGGAGTGGCAGCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAAGCACAGTGTCCAATAGTTGAGAGGCTTACTAATTCTCTCATGATGCATGGTAGAAACAATGGGAAAAAACTAATGGCAGTGAGGATTATTAAACATGCCATGGAAATTATCCACCTTTTGACTGATCAGAATCCTATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGATCTGCTGGTGTCGTGAGGAGACAGGCTGTGGATATCTCACCCCTTCGCCGTGTTAATCAGGCCATATATCTTCTAACTACAGGCGCTCGTGAATCTGCATTTAGAAATATAAAGACCATTGCTGAATGCTTGGCTGATGAACTTATCAATGCAGCGAAGGGGTCATCCAACAGCTATGCAATCAAGAAAAAGGATGAGATTGAAAGAGTTGCGAAGGCAAATCACGATATACTAAAATTTTGTAACCTTGTGCACGTATCCGCAACGGAACGTAGTACCGACTCAATTTTCACGTCCATCGCTCCTCGAATCCACCGGATTGGTGCTCAACCAACGAGGGACACGTCCAACAGTGGGTTGAGCTCAGAGCTGCCGGCTTAA 786 0.4517 MAAAVAIPPEATTSIDPTQIEVKLFNRWTFDDVQVNDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANHDILKFCNLVHVSATERSTDSIFTSIAPRIHRIGAQPTRDTSNSGLSSELPA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1510 261 Gene3D Ribosomal protein S7 domain 5 210 IPR036823 -
Lele14g1510 261 TIGRFAM uS7_euk_arch: ribosomal protein uS7 21 210 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lele14g1510 261 Pfam Ribosomal protein S7p/S5e 64 209 IPR023798 -
Lele14g1510 261 FunFam 40S ribosomal protein S5 6 210 - -
Lele14g1510 261 SUPERFAMILY Ribosomal protein S7 23 209 IPR036823 -
Lele14g1510 261 CDD uS7_Eukaryote 23 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Lele14g1510 261 PANTHER RIBOSOMAL PROTEIN S7 4 209 IPR000235 GO:0006412
Lele14g1510 261 ProSitePatterns Ribosomal protein S7 signature. 76 102 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1510 Lele-ChrLele14 23264391 23269295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1510 1 209 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 85.646 5.53e-132 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1510 14 23264391 23269295 Lele15g0837 15 4853413 4855949 hybridization
Lele14g1510 14 23264391 23269295 Lele16g0857 16 4804271 4807408 hybridization