Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele14g1509 | ATGAGCTTCTGGATGGAGAATCAGGCGAAACATGTTGTGGTTGTTAAAGTCATTGGACGCACTGGATCCAGAGGGCAAGTGACTCAAGTTAGAGTCAAGTTTTTGGACGATCATAACCGTTATATCATGAGGAATGTGAAAGGACCGGTGAGAGAAGGAGACATTCTTACCTTGCTCGAGTCTGAAAGAGAAGCTAGAAGACTTCGCTAG | 210 | 0.4476 | MSFWMENQAKHVVVVKVIGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRLR | 69 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele14g1509 | 69 | FunFam | 40S ribosomal protein S28 | 4 | 69 | - | - | |
Lele14g1509 | 69 | ProSitePatterns | Ribosomal protein S28e signature. | 60 | 68 | IPR028626 | - | |
Lele14g1509 | 69 | PANTHER | 40S RIBOSOMAL PROTEIN S28 | 5 | 69 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Lele14g1509 | 69 | SUPERFAMILY | Nucleic acid-binding proteins | 5 | 69 | IPR012340 | - | |
Lele14g1509 | 69 | Gene3D | - | 4 | 69 | IPR012340 | - | |
Lele14g1509 | 69 | Pfam | Ribosomal protein S28e | 8 | 68 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Lele14g1509 | 69 | CDD | S1_S28E | 10 | 69 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 | |
Lele14g1509 | 69 | Hamap | 30S ribosomal protein S28e [rps28e]. | 5 | 69 | IPR000289 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele14g1509 | Lele-ChrLele14 | 23261400 | 23261766 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele14g1509 | 5 | 69 | Cytoplasmic Ribosomal Protein Gene Family | AT5G03850 | 86.154 | 3.10e-34 | 109 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele14g1509 | 14 | 23261400 | 23261766 | Lele15g0838 | 15 | 4859159 | 4859560 | hybridization | |
Lele14g1509 | 14 | 23261400 | 23261766 | Lele16g0858 | 16 | 4810235 | 4810498 | hybridization |