Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1508 ATGTGTCCTGAAATAATCAGTCCGGATTCTCAAAAGGCAAGGAAATTGCAAAAAATTATTTCAGAAGACATCGAAGCCCGCTGGCTACCTGCTTTGGCGCCGCATCATCGAGAGCAAGCACCAGAACCAGTTATTCTTTACATCTTCCTCGCCTCGTTTAAGCCGAGGAATTCCACTAGTTACGTGAGCGGCACACAGCCAATTCAGTGTTGCGATAAGAGAAGGCAGCCGTGCGAGCAACCCTCGCCATCTGTTTCTCACACGTGGTCGTTAAACCGCTCAGATACTTGGTTATTTTCATTTGCTGTTTGTTGCTCTCTACCAAGGATGGCTTCTAGATTCTGGACACAGGGTGCCAGTGACTCCGAGGAGGAGGAGAGTGACTATGATGAAGATGTTGAGAATGTAGTGGGTGAATCTACCAACCAAGCTGTTAAGAGCAGATACTTGCAGGGTAATGCTAGTGATAGTGATGATTCTGATGATCAGAAGCGTGTTGTTAGGTCAGCAAAAGACAAGCGATTTGAAGAGATGTCATCTACAATTGGCCAAATGAAGAATGCTATGAATATTAATGACTGGGTGAGCTTGCAAGAGAGCTTTGATAAGATAAACAAGCAACTTGAGAAAGTCATGCGTGTCACTGAATCTGAGAAAGTCCCTACGCTTTACATAAAGGCACTTGTGATGTTGGAAGATTTCCTGGCACAGGCTTTGGCAAATAAGGATGCCAAAAAGAAGATGAGTAGCAGTAATGCTAAAGCATTGAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAGCAATATGAGGATTTGATTACTAAATATAGAGAAAATCCTGAGAGTGAGGAGGACAATGAAGAGGAGACTGAGGATGAGGATGAAAGTGAGGAGGAGGTAATTGAGGAGATTGATAAGATACAAAAGTCTGATTCTGAAGATGGTGATCAAGATGATGAGAAGTCAGATGCAATTGATACCCCTTGGGACCAAAAACTTAGCAAGAAAGACAGGCTTATGGATAGGCAATTTATGAAAGACCCTAGTGAGATCTCATGGGACATGGTTAACAAGAAGTTCAAAGAGGTTGTGGCAGCTAGGGGCAGGAGGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTAACAAAAGTTGCCAAAACTCCTGCTCAGAAGCTGGAAATATTTTTCAATGTTGTTTCTGCTCAATTTGATGTTAATCCTGGTTTAAATGGGCACATGCCTATTAGTGTGTGGAAGAAATGCGTGCAGAATATGCTGCTCATTCTTGATATTCTTGTGCAGTACCCCAACATAATTGTTGATGATACAGTGGAGCCTGATGAGAACGAAACTCAGAAGGGTGCTGACCATAGTGGACCAATTCGGGTATGGGGCAACTTAGTTGCATTCCTAGAAAGAATTGATGCTGAGTTTTTCAAGAGCTTGCAATGTATTGATCCTCATACTCGTGAGTATGTTGAGAGACTTAGGGATGAGCCAATGTTTGTGGCTCTTGCTCAGAATGTCCAGGATTATCTTGAAAGGGCTGGAGATTTCAAAGCTTCATCAAAGGTAGCCCTTAGACGTGTTGAACTCATCTATTACAAACCACAGGAGGTTTATGATGCCATGAGGAAATTGGCTGAACTGACAGATGACAATAATGGAGAGGTGGATGACGAGTCTAAAGGGTTTGAGGATACAAGGACTCGTACTGCATTTGTTGTAACTCCTGAGCTTGTTCCACGAAAACCTACCTTTCCAGAGAATAGTAGGACACTAATGGACTTATTGGTGTCCCTAATATACAAGTATGGGGATGAGCGGACAAAGGCACGGGCTATGCTTTGTGATATATATCACCATGCTCTTCTGGATGAGTTCTCAACTGCCCGTGATCTTCTGCTTATGAGCCATTTGCAGGATAGCGTACAGCATATGGACATATCAACACAGATACTTTTTAACAGGGCTATGTCACAGCTAGGTCTTTGTGCTTTTCGGGTTGGACTGATTTCTGAGGCTCATGGCTGTCTCTCTGAATTATATTCTGGTGGAAGGGTGAAGGAACTGCTTGCTCAAGGTGTCTCACAAAGTCGCTATCATGAGAAGACTCCAGAGCAGGAAAGGTTGGAAAGGAGACGCCAGATGCCATATCATATGCACATTAACCTTGAGCTCCTGGAGTCAGTGCATCTTATTTGTGCTATGCTTCTGGAAGTGCCTAACATTGCAGCTAATGACCATGATGCAAAGCGCAAAGTTATTAGTAAGACTTTCCGTCGTTTGCTTGAGGTCAGTGAGAAGCAAACATTTACAGGTCCACCTGAAAATGTCAGAGATCATGTCATGGCTGCTACAAGGGCCCTGAGCAAGGGGGATTTCCATAAGAGTTATGATATCATCAAGTCGCTGGATGTCTGGAAATTTGTTAGAAATCATGTCAAGGTGCTGGAAATGCTAAAGGAAAAAATCAAGGAAGAGGCACTAAGGACTTACCTCTTCACCTTTTCTTCATCCTATGACTCTTTGAGCCTTGAGCAACTCAGAAAAATGTTTGACCTCTCTGTTCCTCACACACATAGCATAGTTAGTAGGATGATGATAAATGAGGAGCTGCATGCAAGCTGGGATCAACCAACTGGCTGCATTATTTTCCAGGATGTAAAGCACTCTAGATTGCAGGCTTTGGCATTCCAGTTGACAGAGAAGTTATCTATCCTCGCGGAGAGTAATGAAAGAGCAATAGAGGCAAGGATAGGTGGTGGTGGATTGGATCTTCCCCTAAGGCGGCGAGATGGCCAGGACTATGCAGCTGCTGCTGCAGCACCAACTACTGTTGGTGGTAGGTGGCAAGACTTGTCAGTTGGTCAGACAAGGCAAGGCAGTGGTACTGGACGTGCAGGATATAGTATGGGTGGTGGAAGGCCATTAACATTGAGCCAAAATGTCTATTCAAGGGACCGAACAGGAAGAGGAGCAGGTGGAGGCTATCAGAGTACGAGATATCAAGACTCTGCATATGGTGGTTCAGGGAGGTCAACTCACGGTTTAGCATTCAGGGGAGCCCATGTGGATGCATCTACTCGCATGGTTAGCCTTAAAGGTGTTCGTGCTTGA 3132 0.4416 MCPEIISPDSQKARKLQKIISEDIEARWLPALAPHHREQAPEPVILYIFLASFKPRNSTSYVSGTQPIQCCDKRRQPCEQPSPSVSHTWSLNRSDTWLFSFAVCCSLPRMASRFWTQGASDSEEEESDYDEDVENVVGESTNQAVKSRYLQGNASDSDDSDDQKRVVRSAKDKRFEEMSSTIGQMKNAMNINDWVSLQESFDKINKQLEKVMRVTESEKVPTLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLITKYRENPESEEDNEEETEDEDESEEEVIEEIDKIQKSDSEDGDQDDEKSDAIDTPWDQKLSKKDRLMDRQFMKDPSEISWDMVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFNVVSAQFDVNPGLNGHMPISVWKKCVQNMLLILDILVQYPNIIVDDTVEPDENETQKGADHSGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFVALAQNVQDYLERAGDFKASSKVALRRVELIYYKPQEVYDAMRKLAELTDDNNGEVDDESKGFEDTRTRTAFVVTPELVPRKPTFPENSRTLMDLLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNIAANDHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRALSKGDFHKSYDIIKSLDVWKFVRNHVKVLEMLKEKIKEEALRTYLFTFSSSYDSLSLEQLRKMFDLSVPHTHSIVSRMMINEELHASWDQPTGCIIFQDVKHSRLQALAFQLTEKLSILAESNERAIEARIGGGGLDLPLRRRDGQDYAAAAAAPTTVGGRWQDLSVGQTRQGSGTGRAGYSMGGGRPLTLSQNVYSRDRTGRGAGGGYQSTRYQDSAYGGSGRSTHGLAFRGAHVDASTRMVSLKGVRA 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1508 1043 MobiDBLite consensus disorder prediction 244 262 - -
Lele14g1508 1043 MobiDBLite consensus disorder prediction 276 333 - -
Lele14g1508 1043 MobiDBLite consensus disorder prediction 283 302 - -
Lele14g1508 1043 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 824 912 - -
Lele14g1508 1043 Coils Coil 253 300 - -
Lele14g1508 1043 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 154 755 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Lele14g1508 1043 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 110 1038 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Lele14g1508 1043 MobiDBLite consensus disorder prediction 243 262 - -
Lele14g1508 1043 ProSiteProfiles PCI domain profile. 723 895 IPR000717 -
Lele14g1508 1043 SUPERFAMILY "Winged helix" DNA-binding domain 822 895 IPR036390 -
Lele14g1508 1043 SMART PINT_4 824 912 IPR000717 -
Lele14g1508 1043 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 111 966 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Lele14g1508 1043 Pfam PCI domain 763 891 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1508 Lele-ChrLele14 23254788 23261201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1508 110 1043 Eukaryotic Initiation Factors Gene Family AT3G56150 67.481 0.0 1197