Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1497 ATGCTGACCGTGGTTCGCGTACACCTCCCCTCTGATATACCCATTATAGGCTGTGAGCTCACGCCGTACGTGCTCATACAGCGACCAGACAAGCATGTTGTTACCCACGACGATGTCCCTGAGACGGCCCCTTTAGATGGCCATTTCTTGCGGTATAGGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAGCAGGCTACACTGCAGTGCCTTGGCTGTGTTAAGGCCAAAATACCTGTTACCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTCTTTTACACGATCGTGCTGCAAGTGCGGTCAATGAAAATGGAACTGAAGAGGAGGAATTATTTGGACGCTATAATAGCTCTGGCTCTGGGGCAGTTAATAACAGTTTATCTAGCTCTGCTTCAAGCGCTAGCTTGGTAAATGTGTCAGCTCCTTTGTATCCAGCTGCTGTTACACAACGAAGTGGTGGTGAAACTTGGATTGAAGTTGGACGATCTAAAACATATACCCCAACAGCTGATGATGTTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGCAGAGGCAAAAGCTCCTGTAGGGCATGTTAATACTATACTGACTTCTCGTGTTATTCCTGCTCCCTCTCCTATTCCACGACGTTTGATTCCTGTTGATAGGATGGCACATATAGATGCAGATGCACGCATAACGTCTTCAGGAACATTCACTGTTCTATCTTACAACATTTTGTCTGATGCATATGCTTCAAATGAACTATATGGTTACTGTCCTCCGTGGGCACTTTCTTGGCCTTACCGCAGGCAAAATTTGTTAAGAGAAATAGTTGGTTATCAGGCAGATATTATTTGTCTTCAGGAGGTACAAAGTGATCATTATGAGGATTTTTTTGCTCCTGAACTGGACAAACATGGTTATTATGGTCTATACAAGAGAAAAACCAATGAGGCATTTGGCAGCAACAGCAACACCAACACAGTTGATGGTTGTGCAACCTTTTTCCGTAGAGACAGATTTTCACATGTTAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAGTCTTTAACAGATGCTATGATTCCAACTGGCCAGAAGAAAGCTGCCTTAAATCGGCTGGTTAAGGACAACATTGCACTAATTGTGGTTCTAGAAGCAAAAGTTAACAATCAGCTAGTTGACAATCCTGGAAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTGCACCAAGATTTAAAAGATGTTAAACTCTGGCAGGTGCACACGCTCTTAAAAGGGTTGGAGAAAATTGCTGCAAGTGCAGATATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTTCTCCACATTCACTTCTTGCATTTGGGAAGGTAGATCAAACTCATCCAGATTTAGCAGTTGATCCCCTTAATATACTGCGGCCACACAACAAGTTGGTTCATCAATTGCCTCTGGTTAGTGCGTACTCATCCTTTGGAAGAACCGTGGGTCTTGGATTTGAGCAGCACAGAAGGAGAGTGGATAGTGCAACAAATGAACCCTTATTCACAAATGTCACCAGGGATTTTATTGGCACTCTAGATTACATATTCTACACTGCGGATTCATTGGTGGTGGAGTCACTATTGGAGCTATTGGATGAGGAGAATCTAGGCGTAACACTTGAAGTTCAGATCTAA 1743 0.4263 MLTVVRVHLPSDIPIIGCELTPYVLIQRPDKHVVTHDDVPETAPLDGHFLRYRWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVTKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTEEEELFGRYNSSGSGAVNNSLSSSASSASLVNVSAPLYPAAVTQRSGGETWIEVGRSKTYTPTADDVGHVLKFECVVVDAEAKAPVGHVNTILTSRVIPAPSPIPRRLIPVDRMAHIDADARITSSGTFTVLSYNILSDAYASNELYGYCPPWALSWPYRRQNLLREIVGYQADIICLQEVQSDHYEDFFAPELDKHGYYGLYKRKTNEAFGSNSNTNTVDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTGQKKAALNRLVKDNIALIVVLEAKVNNQLVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSSPHSLLAFGKVDQTHPDLAVDPLNILRPHNKLVHQLPLVSAYSSFGRTVGLGFEQHRRRVDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEENLGVTLEVQI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1497 580 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 163 572 - -
Lele14g1497 580 Pfam Endonuclease/Exonuclease/phosphatase family 254 570 IPR005135 GO:0003824
Lele14g1497 580 Gene3D Endonuclease/exonuclease/phosphatase 223 578 IPR036691 -
Lele14g1497 580 SUPERFAMILY DNase I-like 249 558 IPR036691 -
Lele14g1497 580 CDD Deadenylase_CCR4 253 556 - -
Lele14g1497 580 FunFam Carbon catabolite repressor protein 4 1 220 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1497 Lele-ChrLele14 23176576 23182320 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0822 06 5082805 5083793 Lele14g1497 14 23176576 23182320 CCT
Lele07g0996 07 5998847 6000685 Lele14g1497 14 23176576 23182320 CCT
Lele08g0810 08 5093420 5094700 Lele14g1497 14 23176576 23182320 CCT
Lele05g0954 05 5910894 5915187 Lele14g1497 14 23176576 23182320 CCT
Lele14g1497 14 23176576 23182320 Lele15g0848 15 4925097 4930592 hybridization
Lele14g1497 14 23176576 23182320 Lele16g0868 16 4892466 4897276 hybridization