Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele14g1484 | ATGGAGCTGGCTCTGAGCTTGGGAGGCGCACCAAAGGGCTTCCCCATACTGGACAAGGCCCCGAGAATGCCCAATAAGGAAGCTGGTTTCTGCATAGCACTCGGCCAAGGTCTCTCTGAGAATGCTTCAGACCAGAATAGGGCAAGTCCCACACGAGTCGAAGATGAGACCAGAGCCTCCTCAGATCCGCCTCTTCAGTTAGACCTTCTTCCCTTCACGCCTGTTCCTCGACCCCACCCAGCTCCCCATCTTCGGATTCCTTGGCTCTCCGATTCTTTGGGATCTCAACGTTTCTCGCCGGATGGAGGATCGAAGGCGTTGGATGCCAACCGTTTGCTGGCTGCAGGAGCGGAGGAGGCGGACGACGGTACTCAACTGTCGTCGTCTCCTAACAGTGTGTCGTCATTTCACATGGACTTCTACTTGAGGAGTGGTAATGCGGGCAGTAAGAGCAAGAGAGAGCTTGAGGGTGAAGGTGAGAGAGTTAGTTCTAGGGCCAGCGACGATGATGAAAACGGGTCGACTCGCAAGAAACTCAGGCTCTCCAAGGAACAATCGGCTTTTCTTGAAGAAAGCTTCAAAGAACAAACTACTCTTAATCCCAAGCAGAAACTGGTTCTGGCAAAACAGTTAAATCTTCGCCCTCGTCAAGTAGAAGTTTGGTTTCAGAACAGAAGGGCAAGGACAAAGTTGAAGCAGACGGAAGTAGATTGCGAGTATCTGAAGAGATGCTGCGAGACGCTGACAGAAGAGAATAGGAGGTTGCAGAAGGAACTGCAAGAACTAAGGGCATTAAAGACGTCTCAGCCATTTTACATGCAGCTTCCAGCTACCACTCTTACAATGTGTCCTTCCTGCGAAAGGGTGGCCACCAACTCATCATCGTCTGCCTCCGCATTAACCACCGTTACGACCCCCAACAACGCTTCTCAGGCATCGCCTCTCATGTCTATCACCAACCCCAGAACGGTCCAGCCTCATCGCACTCCTTCGTCATGA | 999 | 0.5195 | MELALSLGGAPKGFPILDKAPRMPNKEAGFCIALGQGLSENASDQNRASPTRVEDETRASSDPPLQLDLLPFTPVPRPHPAPHLRIPWLSDSLGSQRFSPDGGSKALDANRLLAAGAEEADDGTQLSSSPNSVSSFHMDFYLRSGNAGSKSKRELEGEGERVSSRASDDDENGSTRKKLRLSKEQSAFLEESFKEQTTLNPKQKLVLAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNSSSSASALTTVTTPNNASQASPLMSITNPRTVQPHRTPSS | 332 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele14g1484 | 332 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 40 | 308 | - | - | |
| Lele14g1484 | 332 | MobiDBLite | consensus disorder prediction | 294 | 332 | - | - | |
| Lele14g1484 | 332 | SUPERFAMILY | Homeodomain-like | 167 | 233 | IPR009057 | - | |
| Lele14g1484 | 332 | Pfam | Homeobox associated leucine zipper | 232 | 266 | IPR003106 | GO:0006355|GO:0043565 | |
| Lele14g1484 | 332 | ProSitePatterns | 'Homeobox' domain signature. | 207 | 230 | IPR017970 | GO:0000981|GO:0006355 | |
| Lele14g1484 | 332 | Coils | Coil | 238 | 268 | - | - | |
| Lele14g1484 | 332 | CDD | homeodomain | 176 | 233 | IPR001356 | GO:0003677 | |
| Lele14g1484 | 332 | SMART | HOX_1 | 174 | 236 | IPR001356 | GO:0003677 | |
| Lele14g1484 | 332 | FunFam | Homeobox-leucine zipper protein 18 | 160 | 237 | - | - | |
| Lele14g1484 | 332 | MobiDBLite | consensus disorder prediction | 39 | 78 | - | - | |
| Lele14g1484 | 332 | MobiDBLite | consensus disorder prediction | 149 | 179 | - | - | |
| Lele14g1484 | 332 | Pfam | Homeodomain | 176 | 230 | IPR001356 | GO:0003677 | |
| Lele14g1484 | 332 | SMART | halz | 232 | 275 | IPR003106 | GO:0006355|GO:0043565 | |
| Lele14g1484 | 332 | Gene3D | - | 168 | 237 | - | - | |
| Lele14g1484 | 332 | MobiDBLite | consensus disorder prediction | 147 | 179 | - | - | |
| Lele14g1484 | 332 | ProSiteProfiles | 'Homeobox' domain profile. | 172 | 232 | IPR001356 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele14g1484 | Lele-ChrLele14 | 23107931 | 23109237 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele14g1484 | 162 | 332 | Homeobox Transcription Factor Family | AT4G37790 | 64.943 | 1.47e-69 | 216 |
Transcription factors information