Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele14g1475 | ATGTTTCTGGAGCCATGTGGCAAGGTGTTTCTACATTGGCTTTTGTCGAATGCTGAGTTTCATCTCTCTTCTGAATGGTACGAGCTAGCCCCAAGTCTCCCAACTTGGCTGTTAAGTTTGAGTCCAACGGCTGGGTTTGCTGCAGATGATGCTCCAGGGGCGGTATTCCCTGCCATTGTGGGCCCTCGCCACACAGGTGTGATGGTTGGTATGGGACAGAAGGATGCGTACGTCGGCGATGAAGCTCAGTCAAAGAGAGGTATTGTTATGGACTCTGGAGATGGTGTTAGCCACACGGTTCCCATCTATGAACGCTATGCCCTCCCGCATGCAATCTTACGTTTGGATCTTGCAGGGCGTGATCTCACTGATGCCTTCATGAAAATTTTGACTGAGCGTGGATACTATTTCACCTCTAGTGCGGGGCGTGAAATTGAGAGACGTGAAGGAAAAATTAGCATATATTGCGCTTGA | 474 | 0.4937 | MFLEPCGKVFLHWLLSNAEFHLSSEWYELAPSLPTWLLSLSPTAGFAADDAPGAVFPAIVGPRHTGVMVGMGQKDAYVGDEAQSKRGIVMDSGDGVSHTVPIYERYALPHAILRLDLAGRDLTDAFMKILTERGYYFTSSAGREIERREGKISIYCA | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele14g1475 | 157 | ProSitePatterns | Actins signature 1. | 77 | 87 | IPR004001 | - | |
Lele14g1475 | 157 | Gene3D | - | 87 | 118 | - | - | |
Lele14g1475 | 157 | PRINTS | Actin signature | 51 | 60 | IPR004000 | - | |
Lele14g1475 | 157 | PRINTS | Actin signature | 73 | 84 | IPR004000 | - | |
Lele14g1475 | 157 | SUPERFAMILY | Actin-like ATPase domain | 87 | 147 | IPR043129 | - | |
Lele14g1475 | 157 | SUPERFAMILY | Actin-like ATPase domain | 43 | 89 | IPR043129 | - | |
Lele14g1475 | 157 | Gene3D | Actin; Chain A, domain 2 | 60 | 86 | - | - | |
Lele14g1475 | 157 | Gene3D | Actin; Chain A, domain 4 | 119 | 148 | - | - | |
Lele14g1475 | 157 | Pfam | Actin | 85 | 137 | IPR004000 | - | |
Lele14g1475 | 157 | PANTHER | ACTIN | 86 | 146 | IPR004000 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele14g1475 | Lele-ChrLele14 | 23059424 | 23061669 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele14g1475 | 44 | 89 | Miscellaneous Gene Families | AT3G53750 | 89.362 | 4.41e-21 | 86.3 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele14g1475 | 14 | 23059424 | 23061669 | Lele15g0870 | 15 | 5037001 | 5038996 | hybridization | |
Lele14g1475 | 14 | 23059424 | 23061669 | Lele16g0889 | 16 | 5016167 | 5018924 | hybridization |