Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1475 ATGTTTCTGGAGCCATGTGGCAAGGTGTTTCTACATTGGCTTTTGTCGAATGCTGAGTTTCATCTCTCTTCTGAATGGTACGAGCTAGCCCCAAGTCTCCCAACTTGGCTGTTAAGTTTGAGTCCAACGGCTGGGTTTGCTGCAGATGATGCTCCAGGGGCGGTATTCCCTGCCATTGTGGGCCCTCGCCACACAGGTGTGATGGTTGGTATGGGACAGAAGGATGCGTACGTCGGCGATGAAGCTCAGTCAAAGAGAGGTATTGTTATGGACTCTGGAGATGGTGTTAGCCACACGGTTCCCATCTATGAACGCTATGCCCTCCCGCATGCAATCTTACGTTTGGATCTTGCAGGGCGTGATCTCACTGATGCCTTCATGAAAATTTTGACTGAGCGTGGATACTATTTCACCTCTAGTGCGGGGCGTGAAATTGAGAGACGTGAAGGAAAAATTAGCATATATTGCGCTTGA 474 0.4937 MFLEPCGKVFLHWLLSNAEFHLSSEWYELAPSLPTWLLSLSPTAGFAADDAPGAVFPAIVGPRHTGVMVGMGQKDAYVGDEAQSKRGIVMDSGDGVSHTVPIYERYALPHAILRLDLAGRDLTDAFMKILTERGYYFTSSAGREIERREGKISIYCA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1475 157 ProSitePatterns Actins signature 1. 77 87 IPR004001 -
Lele14g1475 157 Gene3D - 87 118 - -
Lele14g1475 157 PRINTS Actin signature 51 60 IPR004000 -
Lele14g1475 157 PRINTS Actin signature 73 84 IPR004000 -
Lele14g1475 157 SUPERFAMILY Actin-like ATPase domain 87 147 IPR043129 -
Lele14g1475 157 SUPERFAMILY Actin-like ATPase domain 43 89 IPR043129 -
Lele14g1475 157 Gene3D Actin; Chain A, domain 2 60 86 - -
Lele14g1475 157 Gene3D Actin; Chain A, domain 4 119 148 - -
Lele14g1475 157 Pfam Actin 85 137 IPR004000 -
Lele14g1475 157 PANTHER ACTIN 86 146 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1475 Lele-ChrLele14 23059424 23061669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1475 44 89 Miscellaneous Gene Families AT3G53750 89.362 4.41e-21 86.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1475 14 23059424 23061669 Lele15g0870 15 5037001 5038996 hybridization
Lele14g1475 14 23059424 23061669 Lele16g0889 16 5016167 5018924 hybridization