Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1468 ATGGCGTCTAAAGGTCCGAGGTCTAAGATTGATCACGAGAGTAGAGCAAAGCGGCAAAAGGCACTTGAGGCTCCAAGGGAGCCTCGACGTCCTAAAACTCACTGGGATCATGTCATAGAAGAGATGGTGTGGTTATCAAAGGACTTTGAGTCAGAGAGGAAATGGAAATTAGCTCTGGCAAAGAAAGTCGCTTTAAGAGCTAGCAAGGGCATGATAGATCCGGCTACTAGAGGTGAAAAGAAGATGAAGGAAGAAGAGCAGCGATTAAGGAAAGTTGCACTAAATATTTCGAAGGATGTTAAGAAATTTTGGATGAAAATAGAGAAGCTGGTTCTTTACAAGCATCAGATGGAGCTTGATGAGAAAAAGAAAAAGGCACTTGACAAACAGCTTGAGTTTCTTCTGGGTCAAACTGAAAGGTACTCAACCATGTTAGCAGAAAATCTTGTGGATGCTATTAAACCAGTTGAGAAACAGTCACCAGAGCATCATAGGAGTGCCCAATACAAGGGAGTAGATGAAGACGTTATTGACAAATCTAATGAAGCCAATGCTGCAGAGTTTCAGTCAGATCCTATTGACAATGATGAAGAATACAATGTGCAATCTGATGATGAATCGGAGGATGATGAGCAAACCCTTGAGGAAGATGAGGCTCTTATAACTGAAGAGGAAAGGCAGGAGGAGTTGGCAGCTTTGCGTGATGAAGTTGATCTTCCGCTTGAGGAGTTACTGAAACGATATTCTGGAGAGAAAGGACCAGTTAGTGAAGAAAGTAGTCCAGACCACAGTGATGATGATAATAACGAAGTCAGAGTTGGTGATGAAAATGAAAATGGAGACAATATTTTATCTGTTAGCAACCTTGGCTCAAGTAACTCCAGCATGGTCTCTGGTCGTCGTTGTGATGAAAGTAATGGTGGTCTAACTACGCCAGCAGATAATATAGCCGAAGAAAAGACCTGTCAATCTGAAAATCTTGCATATGACTTTAGTGATGAAGAGGAAGATGGTGACTTCTTGCTTGCCACAGAAGATAATGATGATGAAACGACCTTATCCGAGGAGGAAAAATTGGAAAAAATGGATGCAATTGATCCCAAAGATGAGATTGCTTTATTACAAAGGGAGAGTGACATGCCTGTTGATGAACTCCTTGCAATTGGCAAAGATAGGGAAGATGAATCTGAAGATGCTGCTTCTTTGTCGGAAGATCTTTTGGATTCTTCACTTCATGAAGATGATAGGAAGAAGGATACTACTGTTTCTGTGGATGAAGATGTCAAGCCTGTCGATCACATGGCTTTTATACAATCCCAGACTGAAGAACAACATTGGGAAGCACCTAATGAAAATCCGGAGGGAAGGGATAGTGAAAATCTGATAGCAGATGCAGCAGCAGCTGCAAGATCAGCACAACCAACTGGAAACACCTTCTCCACAACTAAAGTGCGCACTAAATTCCCTTTTCTCCTCAAGTATCCTCTCCGTGAGTATCAACACATTGGATTGGATTGGCTTGTAACAATGTACGAAAAAAGGCTGAATGGGATTTTGGCAGATGAAATGGGGCTTGGTAAAACAATTATGACTATAGCTTTGCTTGCACATCTTGCTTGTGAAAGAGGGATTTGGGGCCCACATCTTATTGTGGTACCAACTAGTGTCATGCTTAACTGGGAGACTGAATTTCTCAAATGGTGTCCTGCTTTTAAAATTTTGACTTATTTTGGAAGTGCAAAAGAGAGGAAGCTCAAAAGACAAGGATGGTTGAAACCAAACTCATTTCATGTATGCATAACAACTTATCGATTAATTATTCAGGATTCTAAAGTCTTTAAGCGAAAGAAGTGGAAATACTTGATCTTAGATGAAGCTCATCTCATTAAAAATTGGAAGTCACAAAGATGGCAAACCCTCTTGAATTTCAATTCGAAGCGACGTATTCTCTTGACTGGTACACCACTACAGAATGATCTGATGGAACTTTGGTCTCTCATGCATTTCTTGATGCCTCATGTTTTCCAATCTCATCAGGAGTTTAAGGATTGGTTCAGTAATCCCATATCTGGGATGGTGGAGGGGGAGGAAAAAGTAAATAAGGAGGTTGTTGATCGCTTGCACAATGTCCTTCGTCCATTCATACTCCGTCGCTTAAAACAAGATGTGGAGAAGCAACTTCCAATGAAACATGAGCATGTCATATACTGTAGATTGTCAAAAAGGCAGCGGAATTTGTATGAAGACTTCATTGCTAGTACTGAGACCCAAGCCACACTTGCGAGTGCCAATTTTTTTGGGATGATTAGTATCATAATGCAGCTCCGGAAGGTTTGCAATCATCCTGACCTTTTTGAAGGTCGTCCTATTATCAGTTCTTTTGATATGTGGGGCATTGATGTTCAACTAAGTTCTTCTGTGTGTTCAGTGTTCTCAACCAGCCCCTTTTCATCGGTAGACCTAAGAGGTTTTGGATTTTTATTTACTCATCTTGATTATAGCATGACTTCATGGGAGAGTGATGAAGTAAAAGCTATTGAGACACCTGCAAGTTTAATTATGGAGCGTGCTGATATGAATGGCCTACAAGTAATTAGGCCTAAATTGAAGAATCAGAAAAGTTTTCAAGGAACTAACATTTTTGAGGAAATTCAGAGAGCAATTTGGGAAGAGAGGTGGAGAGAAGCAAAGGAACGTGCAGCAGCTATTGCGTGGTGGAATTCCTTGAGGTGTAAAAAAAGGCCTGTCTATTCAACAACCCTTCGGGATCTTCTTACCATTAGTCATCCTGTATATGACATCCATCAGGTGAAGGCTAACCCTAGGTCATACATGTATTCCTCAAAGCTAGCTGACATTGTCCTCTCACCAGTTGAACGATTCCAAAGGATGGTTGATGTGGTTGAAAGTTTCATGTTTGCAATTCCAGCAGCACGAGCTCCACCTCCTGTTTGCTGGTGCAGCAGAAGTGAAATGCCAGTGTTTCTGCATCCATCATACAAGAAGAAATGCTCTGAAGTTTTGTCCCCCCTTTTGTCGCCAATCAGGCCAGCAATTGTCCGACGGCAGGTGTATTTCCCAGATAGGCGTCTTATCCAATTTGACTGTGGGAAACTGCAGGAACTTGCAAGATTGTTGAGGAAATTAAAATCAGAAGGTCACCGGGCATTGATATTCACGCAGATGACAAAGATGCTTGACATACTGGAGGCTTTCATTAATCTGTATGGTTACACTTATATGAGATTAGATGGATCGACACAACCAGAGGAGAGGCAAACCTTGATGCAACGTTTTAATACAAACCCTAAAATTTTTCTTTTCATCTTGTCAACCCGTAGTGGGGGTGTTGGTATCAATCTAGTTGGAGCCGACACAGTTATTTTCTATGATAGTGACTGGAATCCTGCTATGGATCAACAAGCTCAAGATAGGTGCCATAGGATTGGTCAGACGCGTGAAGTTCATATCTATAGATTGATAAGTGAAAGCACCATTGAAGAGAATATATTGAAGAAAGCAAAACAGAAGCGTGCACTTGATGATTTAGTTATACAGAGTGGGGGTTATAATACTGAATTTTTCAAGAAGCTTGATCCTATGGAATTATTTTCGGGTCATAGAACACTTCCAGTGAAAAACATGCAGAAGGAGAAAAGCCAGAACATTGGGGATGAAGTTTCTGTAAGTAATGCAGATGTGGAAGCAGCATTGAAATATGCCGAAGATGAAGCAGATTATATGGCATTGAAGAAAGTTGAACTGGAAGAAGCTGTGGAAAACCAGGAGTTCACAGAGGAAGCCATTGGGAGACTTGATGAGGATGAGTATGTAAATGAAGATGATACAAAAGTTGATGAGCCTTCGGAATTAGCGGAATCAGTTTCTAAGTCAAGTAAGGAGAATGCATTAATGTTAGTTGGAAGTGATCCTAAGGAAGAAAGACCTCTTTCTGTTTCTATCAAAGAAGATGATGTTGACATGCTGGCTGATGTCAAACAGATGGCTGCAGCGGCAGCAGCAGCTGGACAAGCTATCTCAGCCTTTGAGAACCATCTACGCCCAATCGATCGGTATGCCATTCGTTTTCTGGAGGTGTGGGATCCGATTATAGATAAGGCAGCCTTGGAATCTGAAGTCAGGTTTGAGGACACAGAATGGGAATTGGATCGTATTGAGAAGTACAAGGAGGAGATGGAAGCTGAAATTGATGAAGATGAAGAACCTCTTGTTTATGAAAGATGGGACACTGATTTTGCAACTGAGGCATATCGGCAGCAAGTAGAGGCCTTGGCTCAACATCAGTTAATGGAGGAACTTGAGAATGAAGCTAAGCTGAAAGAAGAGGCTGATGAAGAAAATTGTGATCCTGGAAAAATTCAAACACTGAAGGATTCTAAGCCCGGACCTAAAAAGAAACCCAAGAAAACCAAGTTTAAATCCCTGAAGAAAGGATCTTTAGCCTCTGAATCCAAACCTATGAAAGAAGAACTACAAAAAGACCCAATGTCAATAGATGATGAGATTGTCACTAGTCTGGACCTGGTGTCTCCAAATTCAACTATGCAGAAAAAACGTAAAAAGCCTAAATTTATAGCTGACTGCAAAGAGAAGACACTAAAGAAGACCAAGAGGGCTGCTGATATTTGTGCTTCAGATTCAGATAATGCCTTGTTAGGTTTGCCAGATGACCGTGCAGAATCAAAGCAATGTGAAAGCGTGGTTGAATCTGAACAGAAACCTCCCAGCAGGAGTAAAATGGGAGGGAAAATATCCATAACTCCAATGACAGTCAAACGGATTCTGACAATAAAACCAGAAAAAGTGAAGAAGGGTAATGCTTGGTCCAAAGATGGGGTTCCATCAGCTGATTTTTGGCTGCCACAGGAAGATGCAATTTTATGTGCACTTGTTCATGAATATGGTTCTAACTGGAGTTTGGTTAGTGAAACACTCTATGGTATGACTGCTGGAGGATCATACAGGGGCAGATACCGTCATCCTGTCCATTGCTGTGAGAGATTCAGAGAACTAGTCCAAAAATATGTTTTGTCAACGGCAGACAATGCTAATCATGAGAGGGGCAACAATACTGCCTCTGGAAAGTCTCTTCTGAAAGTCACGGAGGATAACATTCGGATGTTGTTAGATGTTGCTTCTGAGCAGGAAAATAGGGAGTTGTTGCTGCAGAAGCATTTTTTTGCTCTGCTTTCTTCTGTCTGGAAGGCAACATCACATGTTAACCGAAGGCAAAATCTGCTCCCAACACAAAATGGCCACTATTTTGATCATAGTTTTTTTACTTCCATGGGCCATAATTCTCAGAGCCTTCTGAAGAAGCCTTCTGAAAGGATGGCAGTCACTAATCTGGCCCAGAGCAGAAAGTTATTAGCTTCTGCACTTGATGACACCAGCAGTAGGCAACAGGATGATAAAATCTCTCTCTCAAATAAGGGTGACGATGTGCCTGTGACTACTGATCAGCTGGATTTGACCCTGGAATTCCCTAAAGACGAGAGTGCCACCTTAATCTCATTTCCTTCTGTTATAAATTTATCCATACAAGGGACAGAGCCCCTAACATCGTTAATTATCCCAAATGGGGAAGATCATCTTAGAGCTTGTGGATCTGTTGCTGAGGATCGGTTCAGGGAGGCAGCCCGAGCTTGCGAGGAAGATAGTTGTGGATGGGCTTCATCAGTTTTCCCAACAAACGATTCAAGATCCAGACCAGGATCTAAGATACAAGCTTCAGGAAAGCACAAGTCTTCCATCTCTGACTCCATTAAGCCTTCTAAGTCGAAGTCAAAACGAAATTCAATGGATACTAGTGAGATGCGTCACCAACGGGTTGAGCCATTATTCCAGTCATTGCCATCATTTCAAGCTAAGGATCTGAGAATCGATCTTAATTCATTAGCGATGGACGAAACAGTGACTGATGATGTGGATTGCAATCTGCCCTTTGTCCTAAATGAGGAAAATTCGTTGGAAACAGAGACTTTAGGTATGGTCCCACATGATTTCGTTGCTGGCTTAATCTCAGGCCTTGATGATTGTACAGAATTGCCAGAATATACTGACATTGGATAA 6093 0.4161 MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVIEEMVWLSKDFESERKWKLALAKKVALRASKGMIDPATRGEKKMKEEEQRLRKVALNISKDVKKFWMKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDAIKPVEKQSPEHHRSAQYKGVDEDVIDKSNEANAAEFQSDPIDNDEEYNVQSDDESEDDEQTLEEDEALITEEERQEELAALRDEVDLPLEELLKRYSGEKGPVSEESSPDHSDDDNNEVRVGDENENGDNILSVSNLGSSNSSMVSGRRCDESNGGLTTPADNIAEEKTCQSENLAYDFSDEEEDGDFLLATEDNDDETTLSEEEKLEKMDAIDPKDEIALLQRESDMPVDELLAIGKDREDESEDAASLSEDLLDSSLHEDDRKKDTTVSVDEDVKPVDHMAFIQSQTEEQHWEAPNENPEGRDSENLIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKYPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACERGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHVCITTYRLIIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEGEEKVNKEVVDRLHNVLRPFILRRLKQDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASTETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIISSFDMWGIDVQLSSSVCSVFSTSPFSSVDLRGFGFLFTHLDYSMTSWESDEVKAIETPASLIMERADMNGLQVIRPKLKNQKSFQGTNIFEEIQRAIWEERWREAKERAAAIAWWNSLRCKKRPVYSTTLRDLLTISHPVYDIHQVKANPRSYMYSSKLADIVLSPVERFQRMVDVVESFMFAIPAARAPPPVCWCSRSEMPVFLHPSYKKKCSEVLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELARLLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKAKQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRTLPVKNMQKEKSQNIGDEVSVSNADVEAALKYAEDEADYMALKKVELEEAVENQEFTEEAIGRLDEDEYVNEDDTKVDEPSELAESVSKSSKENALMLVGSDPKEERPLSVSIKEDDVDMLADVKQMAAAAAAAGQAISAFENHLRPIDRYAIRFLEVWDPIIDKAALESEVRFEDTEWELDRIEKYKEEMEAEIDEDEEPLVYERWDTDFATEAYRQQVEALAQHQLMEELENEAKLKEEADEENCDPGKIQTLKDSKPGPKKKPKKTKFKSLKKGSLASESKPMKEELQKDPMSIDDEIVTSLDLVSPNSTMQKKRKKPKFIADCKEKTLKKTKRAADICASDSDNALLGLPDDRAESKQCESVVESEQKPPSRSKMGGKISITPMTVKRILTIKPEKVKKGNAWSKDGVPSADFWLPQEDAILCALVHEYGSNWSLVSETLYGMTAGGSYRGRYRHPVHCCERFRELVQKYVLSTADNANHERGNNTASGKSLLKVTEDNIRMLLDVASEQENRELLLQKHFFALLSSVWKATSHVNRRQNLLPTQNGHYFDHSFFTSMGHNSQSLLKKPSERMAVTNLAQSRKLLASALDDTSSRQQDDKISLSNKGDDVPVTTDQLDLTLEFPKDESATLISFPSVINLSIQGTEPLTSLIIPNGEDHLRACGSVAEDRFREAARACEEDSCGWASSVFPTNDSRSRPGSKIQASGKHKSSISDSIKPSKSKSKRNSMDTSEMRHQRVEPLFQSLPSFQAKDLRIDLNSLAMDETVTDDVDCNLPFVLNEENSLETETLGMVPHDFVAGLISGLDDCTELPEYTDIG 2030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1900 1947 - -
Lele14g1468 2030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 718 IPR027417 -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 407 424 - -
Lele14g1468 2030 Coils Coil 207 227 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1483 1503 - -
Lele14g1468 2030 SMART bromneu2 23 94 IPR014012 -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 343 364 - -
Lele14g1468 2030 Gene3D - 1002 1257 IPR027417 -
Lele14g1468 2030 SMART ultradead3 492 685 IPR014001 -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 191 224 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 225 277 - -
Lele14g1468 2030 ProSiteProfiles Myb-like domain profile. 1626 1679 IPR001005 -
Lele14g1468 2030 Coils Coil 1255 1275 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 280 321 - -
Lele14g1468 2030 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1041 1191 IPR001650 -
Lele14g1468 2030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 1226 IPR027417 -
Lele14g1468 2030 Pfam Helicase conserved C-terminal domain 1038 1150 IPR001650 -
Lele14g1468 2030 FunFam Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 1003 1257 - -
Lele14g1468 2030 CDD SF2_C_SNF 1026 1161 - -
Lele14g1468 2030 SUPERFAMILY Homeodomain-like 1624 1681 IPR009057 -
Lele14g1468 2030 Gene3D - 1622 1683 - -
Lele14g1468 2030 FunFam Photoperiod-independent early flowering 1 466 741 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 390 424 - -
Lele14g1468 2030 FunFam Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 742 807 - -
Lele14g1468 2030 FunFam Photoperiod independent early flowering protein 1622 1683 - -
Lele14g1468 2030 CDD DEXQc_SRCAP 496 718 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1900 1925 - -
Lele14g1468 2030 Pfam SNF2-related domain 513 785 IPR000330 GO:0005524|GO:0140658
Lele14g1468 2030 MobiDBLite consensus disorder prediction 155 321 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1 32 - -
Lele14g1468 2030 Pfam HSA domain 27 93 IPR014012 -
Lele14g1468 2030 Gene3D - 742 793 - -
Lele14g1468 2030 PANTHER HELICASE SRCAP-RELATED 15 1930 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1445 1503 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1926 1947 - -
Lele14g1468 2030 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 508 673 IPR014001 -
Lele14g1468 2030 Coils Coil 1430 1456 - -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 1445 1468 - -
Lele14g1468 2030 ProSiteProfiles HSA domain profile. 22 94 IPR014012 -
Lele14g1468 2030 SMART helicmild6 1067 1150 IPR001650 -
Lele14g1468 2030 MobiDBLite consensus disorder prediction 156 181 - -
Lele14g1468 2030 Coils Coil 1382 1402 - -
Lele14g1468 2030 Gene3D - 465 741 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1468 Lele-ChrLele14 23022193 23034258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1468 516 788 RAD5 or RAD16-like Gene Family AT5G43530 29.193 1.63e-28 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele14g1468 SNF2_N 5.4e-70 CL0023