Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1463 ATGAACGAGAACAGAGTTGATTGGCAGGGGCAGATTCAACAGAGGGAGGGGCTAAATGGAGATTTCAGTGCTGAGTCTGGTCATCGTTCTCGTCAATATTTTGATGTGAAACAGGCTTGGAATGTTGGTGGTGGAGGAGCTGAAGAGTCAGCACACATGGGCTCTGCAAAATCGTCTACCACCATTATGGGTGGTTTTGAATCCCCGACTTCTGCTTTTTATGCAACAGAACGATGCATGGGGTTTCCTCAATATCATTCCCAAGTTAACATAGATAATCCCTCTTTGGGCTCTCCATTCTCTAAGATTCACGATTTGGAACTCCCTTTGTATCAATCTCCCAGGGAAAGCACTTTCTTGGATCATTCGCCACACCAAGGTAACTTCAACGACGAATTATCAAACACCTTGCGAGCAGTCGTTAGATCCCAATTCGACCCGGAAAAACCCAATAAAACTCCATGTGGAAATCTGCCAAGCGGCAAGTTTCTTCCAATTGAACAGCACAAATTGTTCATTGATCATGATTCTGCCTCAGTCAGGAGAAACCAAACAGTTGGTTGTGGGTTACCTGTTTCTCATGTAAGCTTCTCTTCACAGCAAGAGAAGCTGTCTCCTCCAATAGTTTCAGCAGCAAATGTTACAACTACTGGAAATCCTCCTTCTAGTGGTGGGGCAGTAATCTCAAGTAAAACACGTATAAGATGGACTCAGGATCTTCATGACAAGTTTGTTGAATGTGTGAATCAGCTTGGGGGTGCTGAGAAGGCTACACCAAAAGCTATATTAAAGCTGATGGACACAGATGGCCTCACTATCTTCCATGTTAAGAGTCATTTGCAGATTCAGAGAAGATTGCAGCTTCGAATTGAAGAGCAGGGAAAGCAGCTGAAGAAGATGTTTGATCAGCAGCAGAAAACATGTAATAGCAGCTTCACGAATTTGGGCAGTACAGAAAATGATGATCCATCAGTTAGTCATAAAGAGGTTGATGTTTCGATTGCCGAAGGGTCTGGAAATTCCTCCTTCTCTTCCAAGATAAGTTAG 1047 0.4355 MNENRVDWQGQIQQREGLNGDFSAESGHRSRQYFDVKQAWNVGGGGAEESAHMGSAKSSTTIMGGFESPTSAFYATERCMGFPQYHSQVNIDNPSLGSPFSKIHDLELPLYQSPRESTFLDHSPHQGNFNDELSNTLRAVVRSQFDPEKPNKTPCGNLPSGKFLPIEQHKLFIDHDSASVRRNQTVGCGLPVSHVSFSSQQEKLSPPIVSAANVTTTGNPPSSGGAVISSKTRIRWTQDLHDKFVECVNQLGGAEKATPKAILKLMDTDGLTIFHVKSHLQIQRRLQLRIEEQGKQLKKMFDQQQKTCNSSFTNLGSTENDDPSVSHKEVDVSIAEGSGNSSFSSKIS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1463 348 MobiDBLite consensus disorder prediction 312 348 - -
Lele14g1463 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 224 281 IPR044848 GO:0003700
Lele14g1463 348 FunFam Two-component response regulator 228 291 - -
Lele14g1463 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 231 284 IPR006447 GO:0003677
Lele14g1463 348 SUPERFAMILY Homeodomain-like 229 284 IPR009057 -
Lele14g1463 348 MobiDBLite consensus disorder prediction 1 20 - -
Lele14g1463 348 Pfam MYB-CC type transfactor, LHEQLE motif 278 307 IPR025756 -
Lele14g1463 348 Gene3D - 230 287 - -
Lele14g1463 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 228 288 IPR017930 -
Lele14g1463 348 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1463 Lele-ChrLele14 22993102 22995127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1463 192 297 G2-like Transcription Factor Family AT5G06800 56.140 1.33e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele14g1463 Myb_CC_LHEQLE 2.7e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1463 14 22993102 22995127 Lele15g0880 15 5113928 5115993 hybridization
Lele14g1463 14 22993102 22995127 Lele16g0902 16 5081087 5082965 hybridization