Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1443 ATGTCCTCTTTATGCTGCTATCCATTGCGGGCAAGTTTATTTTGCTGTGTTCATGTAAACCCTTGTTGTGAGGTGCTTCTGCAAAGTGGTGAAAAAATAATGGAGTCTCATGATGAGACAGGATGCCAGGCACCAGATCGCACCATTCTTTGTATCAACAATTGTGGCTTCTTTGGCAGAGCTGCTACCATGAATATGTGCTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGATCAGGCAAAACTTGTAGCATCATCAGTTGAAAACATTGTGAATGGCAGCTCTAGCAGCAGCATTGGGGAAGAGGCTACGACTGTGTGTTCTACTGATGTACAAATTGGAACTGTGGAGGTCAAGACAATACATGCAGAAATTTGTCAGGATTCATCCTCTAGCAAGAGTTTAGAGATGAAAGTCAAGACTGGTCCCAGCAGATGTACGACTTGCCAGAAGCGTGTTGGATTAACTGGTTTTAACTGCAAATGTGGGAACATTTTCTGTGCATCGCATCGCTATTCTGACAAACACAATTGCACTTTTGATTATCGGACAGTTGGTCAGGACGCTATAGCTAAAGCCAACCCTGTGGTTAAGGCAGAAAAGCTTGACAAAATCTAG 621 0.4332 MSSLCCYPLRASLFCCVHVNPCCEVLLQSGEKIMESHDETGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLVASSVENIVNGSSSSSIGEEATTVCSTDVQIGTVEVKTIHAEICQDSSSSKSLEMKVKTGPSRCTTCQKRVGLTGFNCKCGNIFCASHRYSDKHNCTFDYRTVGQDAIAKANPVVKAEKLDKI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1443 206 ProSiteProfiles Zinc finger A20-type profile. 45 79 IPR002653 GO:0003677|GO:0008270
Lele14g1443 206 Pfam AN1-like Zinc finger 147 183 IPR000058 GO:0008270
Lele14g1443 206 ProSiteProfiles Zinc finger AN1-type profile. 141 187 IPR000058 GO:0008270
Lele14g1443 206 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 50 88 - -
Lele14g1443 206 Gene3D - 34 99 - -
Lele14g1443 206 SMART AN1_Zf_4 147 184 IPR000058 GO:0008270
Lele14g1443 206 FunFam Zinc finger AN1-type containing 6 121 202 - -
Lele14g1443 206 Gene3D - 122 202 IPR035896 -
Lele14g1443 206 Pfam A20-like zinc finger 49 72 IPR002653 GO:0003677|GO:0008270
Lele14g1443 206 PANTHER AN1-TYPE ZINC FINGER PROTEIN 49 206 - -
Lele14g1443 206 SUPERFAMILY AN1-like Zinc finger 136 201 IPR035896 -
Lele14g1443 206 SMART A20_3 48 72 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1443 Lele-ChrLele14 22845864 22846579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1443 38 206 C2H2 Transcription Factor Family AT3G52800 42.690 2.86e-39 131