Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1436 ATGTCGTTATGTTCTATCCCGATCAGGGGATGGGACTCTAAATCCTACCTTCATAAGGGCGGAACTGCAGCAGTAGCGGTGGCAATGGAGAGAGGAAACTCTAAGAAGAAAGCATCAACTCTCTCTTTAGAGCAATTCATCTCACTCATGGCCCCTCTTATTGATTTGGAAAAGGAAACTGAGATATCAAGCTCAATCACGTCAGGCGCGTCGAGAAGTTTGGATACTGCTCAGAAAAGGGGCTCGACAATCCTCAATTTGAAATGTGTCGATGTCCAGACAGGGCTGATGGGGAAATCTCTTATCGAGTTCCAGTCTACCAAAGGAGATGTTCTTCCCTCACATAAGTTCAATATACATGACGTCGTTGTTTTAAAACTCAGCAAGGCTGATTTAGGTTCCCCTGCTCTTGGACAAGGTGTAGTTTACCGCTTAAAGGACTCCTCGATAACAGCTGCCTTTGATGATATACCAGAAGATGGTTTAAATAGTCCCCTCAGGCTGGAGAAAGTGGCAAATGAGGTGACATACCGTAGGATGAAGGATGCATTAATACAGTTGAGTAAAGGAGTACACAAGGGTCCTGCTGCTGACCTAATTCCTGTCTTGTTCGGAGAGAGGCCACCAACAGTGTCCAAGAAGGATGTGTCATTCACTCCATTTAACCCCAACCTTGATCACTCTCAGAAAGATGCAATCTCGAAGGCCCTATCGTCAAAGAATGTGTTTTTGCTCCATGGGCCTCCTGGAACAGGAAAAACGACCACAGTGGTGGAAATCATATTACAAGAAGTGAAGCGTGGATCAAAAATTCTTGTTTGTGCCGCCTCTAATATTGCTGTTGACAACATTGTTGAGCGACTTGTTCCGCGTAGAGTTAAGCTGGTGAGACTGGGTCATCCTGCACGTTTATTGCCTCAAGTACTTGATAGTGCACTGGATGCTCAGGTACTTCGAGGAGACAACAGTTCACTTGCAAATGACATTCGGAAGGAAATGAAGGCATTAAATGGAAAGTTGTTGAAAACCAAAGACAGAAATACAAGGAGGGACATTCAGAAGGAACTGCGAACTCTGTCCAAAGAAGAGCGGAAAAGACAACAGCTTGCTGTAACAGACGTAATTAGAAGTGCTGATGTGATATTGACCACTTTGATTGGAGCTTTTTCTAAGAAGCTGGATAACACTTCATTTGACTTGGTCATTATTGACGAAGCTGCTCAGGCACTTGAGATAGCATGCTGGATACCTATGCTGAAGGGTTCAAGATGTATACTTGCAGGAGACCATCTTCAACTTCCACCAACCATTCAAAGTGTTGAGGCCGAGAAGAAAGGATTAGGACGAACCCTCTTTGAACGACTTGCAGATATGTATGGAGATGAAGTCACATCTATGCTAACTGTTCAGTACCGCATGCATGAACTTATCATGGAGTGGTCTTCTAAAGAGCTCTACAACAGCAAGGTCAAAGCCCATGCAAGTGTTGCTGCACATATGCTGTTTGATCTGGAGGATGTGAAGAGGACCTCTTCAACTGAACCAACACTTCTTCTCGTAGACATAGCTGGATGTGACATGGAAGAAAAGAAAGATGAAGAAGATAGTACCATGAATGAAGGTGAAGCTGAAGTTGCCATGGCCCATGCAAAGAGACTTGTGCAGAGTGGTGTGCTGCCTTCTGATATTGGAATTATTACCCCGTATGCTGCACAGGTTGTTTTACTCAAGATGTTGAAAAACAAGGAGAACTCACTGAAGGATCTTGAAATCTCAACAGTTGATGGCTTCCAGGGAAGGGAGAAGGAAGCCATTATTATATCAATGGTTCGATCTAATTCAAAAAAAGAGGTGGGCTTTCTGAGTGATCGGCGCCGAATGAATGTGGCTGTGACGAGGGCGAGGAGGCAATGTTGCCTTGTCTGTGACACAGAAACCGTAAGTTCTGATGGATTCCTAAAGCGATTGGTTGAGTATTTTGAAGAGCATGGGGAGTATCACAGTGCATCTGAATATCAGCATGAATAG 2028 0.4423 MSLCSIPIRGWDSKSYLHKGGTAAVAVAMERGNSKKKASTLSLEQFISLMAPLIDLEKETEISSSITSGASRSLDTAQKRGSTILNLKCVDVQTGLMGKSLIEFQSTKGDVLPSHKFNIHDVVVLKLSKADLGSPALGQGVVYRLKDSSITAAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHKGPAADLIPVLFGERPPTVSKKDVSFTPFNPNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILVCAASNIAVDNIVERLVPRRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSSLANDIRKEMKALNGKLLKTKDRNTRRDIQKELRTLSKEERKRQQLAVTDVIRSADVILTTLIGAFSKKLDNTSFDLVIIDEAAQALEIACWIPMLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADMYGDEVTSMLTVQYRMHELIMEWSSKELYNSKVKAHASVAAHMLFDLEDVKRTSSTEPTLLLVDIAGCDMEEKKDEEDSTMNEGEAEVAMAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKENSLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLVEYFEEHGEYHSASEYQHE 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1436 675 FunFam DNA-binding protein SMUBP-2 69 171 - -
Lele14g1436 675 Pfam AAA domain 225 439 IPR041677 GO:0004386
Lele14g1436 675 CDD DEXXQc_SMUBP2 224 472 - -
Lele14g1436 675 CDD SF1_C_Upf1 473 661 IPR041679 -
Lele14g1436 675 Gene3D - 471 675 IPR027417 -
Lele14g1436 675 Gene3D - 52 455 IPR027417 -
Lele14g1436 675 FunFam P-loop containing nucleoside triphosphate hydrolase 471 675 - -
Lele14g1436 675 TIGRFAM TIGR00376: putative DNA helicase 372 669 IPR004483 GO:0003677|GO:0005524
Lele14g1436 675 Gene3D - 69 171 - -
Lele14g1436 675 Coils Coil 326 346 - -
Lele14g1436 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 659 IPR027417 -
Lele14g1436 675 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 37 673 - -
Lele14g1436 675 SMART ultradead3 221 472 IPR014001 -
Lele14g1436 675 Pfam AAA domain 448 644 IPR041679 -
Lele14g1436 675 SMART AAA_5 239 457 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1436 Lele-ChrLele14 22791606 22797024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1436 198 408 Core DNA Replication Machinery Family AT1G08840 26.540 1.01e-11 66.6