Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1432 ATGGGGGATTGGCGTACACGTGGAGACGGTACTGGATTGAAAAGTAGGTGGGTTCGAAGAATGCAGTCAAATATGAGCAGCAATAAGCTGTATTCGACCTCTTCTCAAGCTCAGTGCTATGGCCTGGGTAATGAAGCCTTCTCGAGGGACAACATGGTGATGGAAGGGCTTGAAAATGGTGTATCTTTAGGTGCATGTGCTCCTTACCCATATTCAGGACCCAATTACGTAGAAGTGACCTCAAGTCATGGGCCTCAGCCTCTGGTGCTTCCTCATGAGGTAGTTCATACCGCCCAAATGGTCTTACCGCTGGAAATTGCAGAGGAGCCTGTTTACGTGAATGCCAAGCAATACCATGGAATTTTGAGGCGTAGGCGATTACGTGCCAAGGCTGAGCTGGAAAAGAAGCTAATAAAAGGAAGGAAGCCTTACCTCCACGAGTCTCGACATTTGCATGCAATGAGAAGAGCCAGAGGATGTGGCGGCCGTTTCCTCAACACAAAGAAGCTTAATGATACAACTTCTGCCAACACTAGAACCAACAACGAGAATGCTGCAACTTCTGACCTTGATTCAAACTCAACTTGTGATGAAAACAAGCACTGCTCACACGTTCAGGGATTTGATCTTGAGGGTGACTTCTCGGCACAGAAGGCTAAACCGCTCAATCACACTGGGATTGGCAGAGTCCTCGCCATTAATTAA 705 0.4752 MGDWRTRGDGTGLKSRWVRRMQSNMSSNKLYSTSSQAQCYGLGNEAFSRDNMVMEGLENGVSLGACAPYPYSGPNYVEVTSSHGPQPLVLPHEVVHTAQMVLPLEIAEEPVYVNAKQYHGILRRRRLRAKAELEKKLIKGRKPYLHESRHLHAMRRARGCGGRFLNTKKLNDTTSANTRTNNENAATSDLDSNSTCDENKHCSHVQGFDLEGDFSAQKAKPLNHTGIGRVLAIN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1432 234 ProSitePatterns NF-YA/HAP2 subunit signature. 112 132 IPR018362 GO:0003677|GO:0016602
Lele14g1432 234 SMART cbf3 106 167 IPR001289 GO:0003700|GO:0006355
Lele14g1432 234 Gene3D - 107 168 - -
Lele14g1432 234 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 32 204 IPR001289 GO:0003700|GO:0006355
Lele14g1432 234 MobiDBLite consensus disorder prediction 167 193 - -
Lele14g1432 234 PRINTS CCAAT-binding transcription factor subunit B signature 110 132 IPR001289 GO:0003700|GO:0006355
Lele14g1432 234 PRINTS CCAAT-binding transcription factor subunit B signature 141 164 IPR001289 GO:0003700|GO:0006355
Lele14g1432 234 MobiDBLite consensus disorder prediction 164 194 - -
Lele14g1432 234 ProSiteProfiles NF-YA/HAP2 family profile. 107 167 IPR001289 GO:0003700|GO:0006355
Lele14g1432 234 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 109 164 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1432 Lele-ChrLele14 22768694 22773098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1432 60 214 CCAAT-HAP2 Transcription Factor Family AT3G20910 48.077 3.69e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lele14g1432 CBFB_NFYA 6.5e-26 No_clan