Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele14g1411 | ATGGAGAGTTTATTGAAGGATTTCGAGTTGGAGCCCAAGAATCCATCCACCGAAGCCATGAGGAGATGGAGATCCGCCGTCAGGTTGGTCAAGAATCCTCGCAGAAGGTTCCGTATGGTCGCCGATCTCGACAAGCGTTCCGAAGCCGAGAGGATGAAGCAGAAAATCCAGGAAACGATTCGGATTGCTCTTTACGTTCAAAAGGCGGCATTGCAGTTTATTGATGCTGGAGGTCGAGTTGATTACTGTCTATCAGATGAGGCAAGAGAAGCTGGTTTTGGAATTAATCCAGATGACATTGCCTCCATCGTTCGTAGCCATGATATTAAGAAATTGAGAATGACTGGAGGAGTTGAAGGGGTTGCATCAAAATTATCTGTCTCCTCCATGGATAAAGGTGTCAGTGAAAACAGTATAAATACCAGGCAACAGATTTATGGGTGCAACCGTTATGCAGAGAAACCTACTAGAACTTTCCTGATGTTTGTGTGGGAAGCATTGCATGACTTAACGCTAATCATTCTTATGGTTTGTGCTTTAGTATCTATAGGTGTAGGGATTGCCACTGAAGGGTGGCCGAAGGGCGTGTATGATGGTCTGGGAATCATACTTAGTGTATTCTTGGTAGTCATTGTTACTGCTGTCAGTGACTACAAGCAATCACTGCAGTTCAGGGATTTGGACAGGGAGAAGAAAAAGATATTTGTTCAGGTCACCAGGGATGGGAAAAGGGAGAAGATATCAATTTATGATCTGGTGGTGGGAGATATTGTCCATTTGTCAACGGGGGATCAAGTGCCAGCTGATGGGATTTTCATGTGGGGATACAACTTGCTGATCGATGAGTCAAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTGAATGAAGAAAAACCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGAAGATGTTAGTGACGACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACCCTAAGCGAGGGTGGAGAGGATGAGACCCCATTGCAAGTGAAATTGAACGGAGTTGCTACTATTATTGGTAAGATTGGTCTGGCTTTTGCTGTAGTAACATTTCTGGTGTTGGTAATAAGATTTATAGTGGAAAAGGCACAGCATGGTGATTTTACTAATTGGTCTTCAAATGATGCAATGAAGATGCTGGACTACTTTGCTATCGCGGTTACCATAATAGTTGTTGCAGTTCCTGAAGGATTACCATTGGCTGTGACACTCAGCCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTGAGGCATCTTGCAGCCTGCGAGACAATGGGTTCATCCAGTTGCATTTGCACAGATAAGACAGGGACACTGACTACTAATCATATGGTGGTTGATAAAATATGGACATGCGAAAAATCCATGGAAATGAAAGGTAAAGAGAGCAGAGACAAATTGAAAGCGGAAATATCTGAAGTAGTTCTGAGCATCCTTTTCCAAGCTATATTTCAAAATACTTCTGCTGAAGTTGTTAAAGGTAAGGATGGAAAGAATACAATATTGGGAACACCAACGGAATCTGCATTAGTGGAATTGGGGTTGTCTTTGGGTGGTGATTTTGATGCTCAGCGCAGGGAGTACAAGATTGTTAAGATTGAGCCTTTCAACTCAGTCCGGAAGAAGATGTCTGTACTTGTGCGTCTTCCTGATGGACGGGTACGAGCTTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACCAAATTATTGATTCTAATGGAAATACAGTTGATCTTCCTGAAGATCGTGCAAAGAATGTCTCTGATGTGATTAATGGTTTTGCCTCTGAAGCTTTAAGAACTCTTTGTTTGGCTTTCAAAGATATAAATGATACCCAAGGGGAGGCTAGTATCCCTGATAATGGCTATACACTGATAGCCCTTGTAGGAATCAAGGATCCCGTGCGCCCTGGGGTTAAAGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACAGTTCGTATGGTCACTGGTGACAATATAAATACAGCTAGGGCTATAGCTAAAGAATGTGGTATACTTACTGAACGTGGTGATGCCATTGAAGGACCAGAATTTCGAAACCTGACTCCTGAGCGAATGAGGGATATCATACCAAAAATTCAGGTAATGGCACGATCCTTACCTCTTGACAAACATACTTTAGTTACAAATTTGCGGAATATGTTTGGTGAGGTTGTGGCTGTTACAGGCGACGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGACTTGCCATGGGCATAGCTGGCACCGAGGTTGCGAAAGAAAATGCTGATGTCATCATAATGGATGATAACTTCACAACTATTGTCAATGTGGTCAGATGGGGACGGGCAGTATACATAAATATTCAGAAATTTGTACAATTTCAGTTAACAGTCAATGTGGTCGCTCTGGTGATCAACTTTGTTTCTGCATGCTTCACAGGATCTGCTCCTCTAACAGCTGTACAATTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCCCTGGCCACAGAACCTCCTAATGATGGGCTCATGAAAAGGCCTCCTGTTGGTAGAGGAACAAGCTTCATCACCAAAGCCATGTGGAGAAATATCATTGGTCAAAGTATATATCAACTAATTGTCCTTGCAATTCTCAATTTTGATGGGATGAACCTTCTGAGACTCACTGGTCCATATGCAACTGGTGTCCTAAACACGTTGATATTCAACTCCTTTGTTTTTTGCCAGGTTTTCAATGAGATCAACAGCCGAGACATAGAGAAGATAAACATATTGAGAGGCATGTTTGACAGTTGGATATTTTTAGCTGTGATTTTCTCCACAGTGGCATTTCAAGTGGTCATTATTGAGTTCTTGGGAACATTTGCCAGCACCGTGCCTCTGAACTGGCAACTATGGGTACTGAGTGTGTTAATTGGAGCAGTAAGCTTGCCCATAGGGGCTATCCTGAAGTGCATTCCTGTGGAAAAAGCTGCTCCAAAACACCACCACGATGGCTATGAAGCATTGCCTTCTGGTCCTGACATGGCGTAA | 3105 | 0.4283 | MESLLKDFELEPKNPSTEAMRRWRSAVRLVKNPRRRFRMVADLDKRSEAERMKQKIQETIRIALYVQKAALQFIDAGGRVDYCLSDEAREAGFGINPDDIASIVRSHDIKKLRMTGGVEGVASKLSVSSMDKGVSENSINTRQQIYGCNRYAEKPTRTFLMFVWEALHDLTLIILMVCALVSIGVGIATEGWPKGVYDGLGIILSVFLVVIVTAVSDYKQSLQFRDLDREKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDQVPADGIFMWGYNLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATIIGKIGLAFAVVTFLVLVIRFIVEKAQHGDFTNWSSNDAMKMLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLAACETMGSSSCICTDKTGTLTTNHMVVDKIWTCEKSMEMKGKESRDKLKAEISEVVLSILFQAIFQNTSAEVVKGKDGKNTILGTPTESALVELGLSLGGDFDAQRREYKIVKIEPFNSVRKKMSVLVRLPDGRVRAFCKGASEIILRMCDQIIDSNGNTVDLPEDRAKNVSDVINGFASEALRTLCLAFKDINDTQGEASIPDNGYTLIALVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTARAIAKECGILTERGDAIEGPEFRNLTPERMRDIIPKIQVMARSLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVVRWGRAVYINIQKFVQFQLTVNVVALVINFVSACFTGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMKRPPVGRGTSFITKAMWRNIIGQSIYQLIVLAILNFDGMNLLRLTGPYATGVLNTLIFNSFVFCQVFNEINSRDIEKINILRGMFDSWIFLAVIFSTVAFQVVIIEFLGTFASTVPLNWQLWVLSVLIGAVSLPIGAILKCIPVEKAAPKHHHDGYEALPSGPDMA | 1034 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele14g1411 | 1034 | PRINTS | H+-transporting ATPase (proton pump) signature | 783 | 808 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | PRINTS | H+-transporting ATPase (proton pump) signature | 608 | 626 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | PRINTS | H+-transporting ATPase (proton pump) signature | 751 | 767 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | CDD | P-type_ATPase_Ca_PMCA-like | 139 | 884 | - | - | |
| Lele14g1411 | 1034 | Gene3D | - | 132 | 333 | - | - | |
| Lele14g1411 | 1034 | SFLD | p-type atpase | 432 | 803 | IPR044492 | - | |
| Lele14g1411 | 1034 | PANTHER | CATION TRANSPORTING ATPASE | 68 | 1012 | - | - | |
| Lele14g1411 | 1034 | FunFam | Calcium-transporting ATPase | 460 | 655 | - | - | |
| Lele14g1411 | 1034 | Pfam | E1-E2 ATPase | 235 | 428 | - | - | |
| Lele14g1411 | 1034 | FunFam | Calcium-transporting ATPase | 15 | 75 | - | - | |
| Lele14g1411 | 1034 | SUPERFAMILY | Calcium ATPase, transduction domain A | 235 | 331 | IPR008250 | - | |
| Lele14g1411 | 1034 | Pfam | Cation transporting ATPase, C-terminus | 836 | 1009 | IPR006068 | - | |
| Lele14g1411 | 1034 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 48 | IPR024750 | GO:0005516 | |
| Lele14g1411 | 1034 | Gene3D | - | 460 | 655 | IPR023299 | GO:0000166 | |
| Lele14g1411 | 1034 | Pfam | Cation transporter/ATPase, N-terminus | 116 | 182 | IPR004014 | - | |
| Lele14g1411 | 1034 | Gene3D | - | 165 | 1010 | - | - | |
| Lele14g1411 | 1034 | Gene3D | - | 447 | 796 | IPR023214 | - | |
| Lele14g1411 | 1034 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 456 | 660 | IPR023299 | GO:0000166 | |
| Lele14g1411 | 1034 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 104 | 1013 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Lele14g1411 | 1034 | Gene3D | - | 15 | 76 | - | - | |
| Lele14g1411 | 1034 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 115 | 1012 | IPR023298 | - | |
| Lele14g1411 | 1034 | SUPERFAMILY | HAD-like | 449 | 856 | IPR036412 | - | |
| Lele14g1411 | 1034 | FunFam | Calcium-transporting ATPase | 768 | 1014 | - | - | |
| Lele14g1411 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 670 | 680 | - | - | |
| Lele14g1411 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 648 | 659 | - | - | |
| Lele14g1411 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 450 | 464 | - | - | |
| Lele14g1411 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 775 | 787 | - | - | |
| Lele14g1411 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 281 | 295 | - | - | |
| Lele14g1411 | 1034 | PRINTS | P-type cation-transporting ATPase superfamily signature | 751 | 770 | - | - | |
| Lele14g1411 | 1034 | SMART | Cation_ATPase_N_a_2 | 112 | 187 | IPR004014 | - | |
| Lele14g1411 | 1034 | SFLD | C1.7: P-type atpase like | 432 | 803 | - | - | |
| Lele14g1411 | 1034 | FunFam | Calcium-transporting ATPase | 648 | 796 | - | - | |
| Lele14g1411 | 1034 | Pfam | Cation transport ATPase (P-type) | 506 | 589 | - | - | |
| Lele14g1411 | 1034 | FunFam | Calcium-transporting ATPase | 212 | 333 | - | - | |
| Lele14g1411 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 389 | 475 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 718 | 839 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 202 | 372 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 547 | 696 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Lele14g1411 | 1034 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 452 | 458 | IPR018303 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele14g1411 | Lele-ChrLele14 | 22630935 | 22637753 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele14g1411 | 56 | 1031 | Primary Pumps ATPases | AT3G57330 | 73.873 | 0.0 | 1492 |