Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1402 ATGGACCGTAGCGTAGTCATTGCTGTGCCTTTTCAATATGCATTCCTTGCTTCCACATTCACGCTAATGAGGACCATGTCAATGTGGAACTGCTGGTTTGGATGCAGCAAAAAGCTCTCGACTTGTGAGGCAAGGCCCAAAAATTCAAAGAGATGGAGTTGTGGTCTTGGGGGGGTCAAGCAGAAACAACATCCCACACTTACAGAACCAAACAGAACACTAAGTGAAGCAAGAGAAGAACAGAGAAAGCATGCATTGACAGTGGCTATTGCAACAGCAGCAGCTGCTGAGGCTGCAGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGACTCACAGGCGCTTCTCGCTCCTTCTCATATCTCTCCGAGGGAAACCGAAACTCGGCCGCTACTAAAATTCAAAGTGCATACCGTGGACATCTGGCCAGGAAAGCATTCAGAGCACTGAAGGGAATTATCAGACTGCAAGCTATAGTTCGTGGTCGAGCTGTGAGACGTCAAATGGGTTTGCATTCCAATGGAAGAAAGCAGGTAGGAATCCAGAAAAGCAGCAGCCATGCTGCAGATAGAATCAACAAAAATGATAAGACCAAGCAGCTTCCAAAGCAGAAAAAGAAGTTGGAAGATACGGAAATGAAGCTTGAATGTCACAGACAAAGAACTTGGGATTGCAGCTCGCACACAAAAGAAGACATGGAAGCTATATGGTTGAGAAAGCAAGAGGCTATTATTAAAAGAGAACGCATAAGGCAGTACTCTTTCTCACATCGGGAGAGGAAATTTTGCAACGTAGGGGTTGAGTCATCAGTTCCCTATAAGGAATTTAGAGGAGAGAGCTGCCGTACTCTAGGACAATGGCTGGACAGAGAAAAATGTAATGGAGATGTGTTTTCTAAAGCAACAATTCCTTCAAACTTGATCGCTAGGGAATGGTATGATACAGCACAAGAACATTTGCAAGAAGACGAATTGACTTCAGTCACTTCTTCACAGCTTTCATTTCCAAGGAAGTCATTTTCTTGTGTGAAGAAAAGTTCAGTTGTAGATGAAAGTTTCATGCCAAATTCTCCAGTGTTGCCAACGTTGATGGGTGTGAGAGCAAAGGCAAGGTCGATTAGCACTCCGAGACAAAGAACAGGATTTATGGAAATAAACTCAGATCGGACAGATTCTCTGAGTGAAGGCAGAACTTGTAGGTCTTGTTGTCATGAAGCAAGTAGCAGCGCCAATGGAGAAAATGAAGTTTCTCGGCAGAGATGTCAGAGTGTCAACCGCCACTACTATCGTTAG 1293 0.447 MDRSVVIAVPFQYAFLASTFTLMRTMSMWNCWFGCSKKLSTCEARPKNSKRWSCGLGGVKQKQHPTLTEPNRTLSEAREEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGASRSFSYLSEGNRNSAATKIQSAYRGHLARKAFRALKGIIRLQAIVRGRAVRRQMGLHSNGRKQVGIQKSSSHAADRINKNDKTKQLPKQKKKLEDTEMKLECHRQRTWDCSSHTKEDMEAIWLRKQEAIIKRERIRQYSFSHRERKFCNVGVESSVPYKEFRGESCRTLGQWLDREKCNGDVFSKATIPSNLIAREWYDTAQEHLQEDELTSVTSSQLSFPRKSFSCVKKSSVVDESFMPNSPVLPTLMGVRAKARSISTPRQRTGFMEINSDRTDSLSEGRTCRSCCHEASSSANGENEVSRQRCQSVNRHYYR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1402 430 Coils Coil 201 221 - -
Lele14g1402 430 SMART iq_5 126 148 IPR000048 GO:0005515
Lele14g1402 430 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Lele14g1402 430 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
Lele14g1402 430 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Lele14g1402 430 MobiDBLite consensus disorder prediction 189 212 - -
Lele14g1402 430 Gene3D - 126 174 - -
Lele14g1402 430 PANTHER IQ-DOMAIN 5-RELATED 60 400 - -
Lele14g1402 430 MobiDBLite consensus disorder prediction 173 212 - -
Lele14g1402 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 169 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1402 Lele-ChrLele14 22569020 22571963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1402 32 384 IQD Protein Family AT5G03960 42.513 2.02e-50 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1402 14 22569020 22571963 Lele15g0950 15 5534230 5536803 hybridization
Lele14g1402 14 22569020 22571963 Lele16g0970 16 5503008 5505119 hybridization