Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1370 ATGTTGGCTTTATCGCCTTCTCTGTTCGCACCCATTGAGTCGGCCCTGGAGGAATCCACAACAAGTCGTAATGGTCAGAACTTGTTTTACAAAGACGGAACCACTCTTCCGTTTAGTTGCTCGCCACCTCCACCAGATCATCAGGTTCAGGTTGAGGAGGCTCAGAGATCTCCACCAATATCCCTTGCCGTAAGTGGAGACCCTACCATGGTAAAAAAGCTTAACCACAATGCCAGTGAACGCGATCGTCGCAAGAAGATCAATAGCGTGTATTCCTCACTTCGTTCTATGCTTCCTTTGTCTGATCAAACGAAGAAGTTAAGCATTCCGGCAACGATTTCACGAGTCCTAAAGTACATACCCGAGTTACAGAAGAATGTAGGAGTGCTTGTCAAGAAAAAGGAGGAGCTTTTGTTGAGAATCTCTCGCCAAGGAGATGCGTCAAGGAAAGAATCTCGAAGGAAAATGGCTCATCACTACGCAGCCACTGTTTGCGTAGTTTCAATAAGCAGGCTCAATGATAACGAATCTGTAATTCAGATTTCGTCTGACAAGATCCACAAGACTCCTTTTTCAGAGATATTGCTGTGTTTAGAAAAGGAAGGGCTTTTACTGCTAAATGCTTCCACCTTCGAGACCTTTGGACAAAGGATCTTGTATAACTTGCATTTGCAGATGGATGAAACGTGTAGAATAGAGCCAGAAATTCTAAGCGAGAAGATTTTGTCAGTATATGAGAGGAAGGAAGGGAATTTTCAATGTTTCTAA 768 0.4362 MLALSPSLFAPIESALEESTTSRNGQNLFYKDGTTLPFSCSPPPPDHQVQVEEAQRSPPISLAVSGDPTMVKKLNHNASERDRRKKINSVYSSLRSMLPLSDQTKKLSIPATISRVLKYIPELQKNVGVLVKKKEELLLRISRQGDASRKESRRKMAHHYAATVCVVSISRLNDNESVIQISSDKIHKTPFSEILLCLEKEGLLLLNASTFETFGQRILYNLHLQMDETCRIEPEILSEKILSVYERKEGNFQCF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1370 255 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 48 241 IPR015660 -
Lele14g1370 255 SMART finulus 77 129 IPR011598 GO:0046983
Lele14g1370 255 FunFam Transcription factor ORG2 67 161 - -
Lele14g1370 255 Gene3D - 67 158 IPR036638 GO:0046983
Lele14g1370 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 141 IPR036638 GO:0046983
Lele14g1370 255 Pfam Helix-loop-helix DNA-binding domain 72 124 IPR011598 GO:0046983
Lele14g1370 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 123 IPR011598 GO:0046983
Lele14g1370 255 CDD bHLH_AtORG2_like 72 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1370 Lele-ChrLele14 22388435 22389587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1370 1 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 42.857 6.32e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele14g1370 HLH 4.7e-12 No_clan