Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1356 ATGCTGGTTCCAGACCACACCCAGCCATCTCTGGAGACTTTGGTACCGTACAGATTTTTGAGCCTGCCTGCCTGGAAAATTTGCTCTCTGGAAATGCAAATGGAAATAGAAACTCCATTTCCAATGTTTGGTTGCCATGAATCTGGAAAGTGGAAAATGATTTTCAAGGCTAAAGCCCACCCTTCACTCCATCGTCCTCCCATCGTCGCCGTTGACCCCGGGTCTTTCACGGCAACGGGCATGGTACTGGTGTACCCACAACAAATAGTCCCACATGCAACCCACAGGACATATTTATCTCAAATAGAAAAGCCTCTCACTCCTCTTGTTTTTGTCTACTCAATGGCAAGGCGCTTGGCTCCATTGTTTAATCGCGTTTTGGTGGAGAAGATCGTTCCTCCATCGAAAACTAACGCCGGGATTTTGCTTCCAGAGAAATCCAATAAGCTGAATTCTGGAAAAGTGATTGCCGTGGGCCCTGGCATTCATGATAAAGAGGCAAAGCTAATTCCTGTACCTGTAAAGGAGGGTGACACTGTCCTTTTACCGGAATATGGAGGATTGGAGGTGAACCTCGGTGACGAAGAGTATCATTTGTATCGAGATGAGGACCTACTGGGCACGTTGCATGATTGA 636 0.4701 MLVPDHTQPSLETLVPYRFLSLPAWKICSLEMQMEIETPFPMFGCHESGKWKMIFKAKAHPSLHRPPIVAVDPGSFTATGMVLVYPQQIVPHATHRTYLSQIEKPLTPLVFVYSMARRLAPLFNRVLVEKIVPPSKTNAGILLPEKSNKLNSGKVIAVGPGIHDKEAKLIPVPVKEGDTVLLPEYGGLEVNLGDEEYHLYRDEDLLGTLHD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1356 211 SMART Cpn10_2 118 209 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 CDD cpn10 118 209 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 PRINTS 10kDa chaperonin signature 140 161 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 PRINTS 10kDa chaperonin signature 196 209 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 PRINTS 10kDa chaperonin signature 119 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 PRINTS 10kDa chaperonin signature 175 187 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 Gene3D GroES chaperonin 114 211 IPR037124 GO:0006457
Lele14g1356 211 SUPERFAMILY GroES-like 117 210 IPR011032 -
Lele14g1356 211 Pfam Chaperonin 10 Kd subunit 119 208 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 PANTHER 10 KDA HEAT SHOCK PROTEIN 116 208 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele14g1356 211 FunFam 10 kDa chaperonin, mitochondrial 112 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1356 Lele-ChrLele14 22300538 22308834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1356 117 210 Calmodulin-binding Proteins AT5G20720 38.542 6.52e-11 58.5