Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1350 ATGAAAATGGGTGATGATTGGCAGATGACAACAGCTATTGCTATAGAGGACGTAAGGAGAGAAGTGAAGATGTTGCGGGCTCTTACGGGACATAAGAACCTGGTGCAATTCTACGAGGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGGTGTGGTTCATCGAGATCTCAAGCCAGAGGTGATCCACTCATAAAGCTTACTGATGTTTATGTTTGTGATGAAAGGTTGGATGATATTGTGGGAAGTGCATACTATGTGGCTCCTGAAGTTTTGCACAGATCTTATGGGACTGAAGCAGACATGTGGAGCATCGGTGTAATTGCTTATATTCTATTATGTGGAAGCCGTCCTTTCTGGGCCCGGACAGAATCTGGCATCTTTCGAACTGTCCTTAAGGCAGATCCACGTTTTGATGAAACTCCTTGGCCTTCTTTATCAGCTGATGCAATAGATTTTGTAAAGAGACTATTGAACAAGGACTATCGTAAGAGATTAACTGCAGCTCAGGCTCTTTTAGCTCAGCTAGCTTATTTCAGAGAACAATTTTCTCAGTTAGGGCCGAATAAAAATGGATATATCGGAATGCAGAACTTTAAGATGATTAGTTCTATCCAATACAGGAAATTAGACTTTGAGGAATTTTGTGCTGCTGCTATAAGCGTGCACCAGCTAGAGGGTATGGAGACCTGGGAGCAACATGCAAGGCGAGCTTATGAGCTATTTGAAAAGCGTGGAAATAGACTAATTATGATTGAAGAACTAGCCTCGATGGCAAACTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGGGTTTCTTCCCGCATATTTCAGAAGGCTTGAGAGAACACTGGGCCTTTCAAGGTTGGGGGTTGTGAAGTTAGAATATTGTGTACAGATGATGGTAGATTACAGATTGTACTTACGATTAGCAGAAGTACTCAAAACTCAGCTTTGTTTTGGCGATCCCTTGTTTGCCAATGGCACTATCAATAAACTGTTCCCAGTGTTGTAA 1035 0.4184 MKMGDDWQMTTAIAIEDVRREVKMLRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGCGSSRSQARGDPLIKLTDVYVCDERLDDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPRFDETPWPSLSADAIDFVKRLLNKDYRKRLTAAQALLAQLAYFREQFSQLGPNKNGYIGMQNFKMISSIQYRKLDFEEFCAAAISVHQLEGMETWEQHARRAYELFEKRGNRLIMIEELASMANLVSWGLSDFCMGFLPAYFRRLERTLGLSRLGVVKLEYCVQMMVDYRLYLRLAEVLKTQLCFGDPLFANGTINKLFPVL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1350 344 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1350 344 Gene3D - 184 308 - -
Lele14g1350 344 SUPERFAMILY EF-hand 181 276 IPR011992 -
Lele14g1350 344 FunFam Calcium-dependent protein kinase SK5 93 182 - -
Lele14g1350 344 SUPERFAMILY Protein kinase-like (PK-like) 13 179 IPR011009 -
Lele14g1350 344 FunFam CDPK-related kinase 1 10 58 - -
Lele14g1350 344 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Lele14g1350 344 Gene3D Transferase(Phosphotransferase) domain 1 59 183 - -
Lele14g1350 344 SMART serkin_6 7 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1350 344 PANTHER SERINE/THREONINE-PROTEIN KINASE 10 57 - -
Lele14g1350 344 Pfam Protein kinase domain 16 57 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1350 344 Pfam Protein kinase domain 81 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1350 Lele-ChrLele14 22269968 22273554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1350 8 307 EF-hand Containing Proteins AT1G49580 46.154 1.63e-105 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele14g1350 Pkinase 1.6e-20 CL0016