LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele14g1338	ATGGATTCTCTCCTTTTCGCTGATGACGACGATACCTTGTTTTCTGAGGCATTCCCCTCCGATTTTGACTTAGGGTTGGATGGCGATTTCGAGATTAACTTCGACGATCTTGACAATCTCCGTCTTCCCTTTAATGTCGACGAATTCCTTTTCGACGACGCATCTGTTATTCCTCCCTCGCAGTCGCAGATTGATGATAATCGTCAAGGAGAAGCTAATTGCGATAGCAATCCGACTTCCGACGTAGCTAGGTTTTCGAAATCGCAGTCTTATCCGCCTCCCTGTTTAGATAATTCAGGCGATCAGAATCCGCATGGTTCACACGAGTCTAAAGTTTCAAACTTCCAATCGCCGGAGTCTGATTCTTGCGCCCGGGAATCTTCGGGTGGGCCAATTTCATCTCAGGGTTCGGCTAACGGTGGGTCAGGTGGTTCTGATTTTGCGGATTCACCTTCACCGACCCGATACGAGAGAGATTTTACATCTCAGGTTATTGATGACGAGAACGTAAAGTTGGATGAAATCGGGAAGGGCTCCTATTTGAAGAGGAAGATGGAAAACAACGGAGGAAATGCTGCGACGCCTATGGAGAATACGACTCGAGAGCCTGGTGTTAGTATTATCAATGAGGACAACGAGAAAAAGAAGGCTAGGTTGATGAGGAATCGGGAAAGTGCCCAGCTTTCTAGGCAGAGAAAGAAGCAGTATGTGGAGGAGCTTGAGGAGAAGGTGAAATCAATGCGTTCGACCATTGCCGATTTGAATAGTAAGATATCATTCGTCATGGGCGAGAATACCACTTTGAGACAGCGATTGATTGCTGGTGGAATGTGTCCACCGCCACCAGCTCCGGGGATGTATACCCATTCTCGGATGCCTACCATGCCTTATTCTTGGGTGCCGTATGGCCCCTATGTTGCTAACCCACTAGGGTCCCAGGCTCCTTTGGTACCAATTCCGAGATTAAAGTCTCAGCCACCGGCATCAGCCTCCAAGAGTAAAACGTCCGAGCGTAAGAAATCTGATGGTAAAACTAAAAAGGTTGCCAGTGTCTGTTTTTTGGGTTTGTTATTCTTTGTCTTGCTTTTTGGTGGATTGGCTCCCCTTGTGAATGTTAAGTTTGATGGTTTAACGGACGTTACTTATGGGAGGTCGCAGTATGTAAGTGATAGGTTCTATAGTCATCTCGGAGGGAAAGTCTGGCCCGTAAATGGTCCTATGAATAGGTCTGAAGGATACAAAGGAGCAGAATCTTCCAGTGGAAGATCTAGTATATTTGACAGGGCGACTGATGAGAAGCGGGACACACACCATAAATCAGGTTCAGATGAATTTGTTCATCTGGGTAATACTAGTGAGCCTCTTTTTGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGGGATTTGATAATCAATTCTGTCTTGGCCAGTGAGAAAGCTAAGGCGTCTCAAGCTTCTCATATGGCAAAGAATGATAAAAGAGAAACTGGTTTGGCAATTTCTAAATATGGGGATTCTGCATTGGCTATTCCGGAAGTTGGAATAAATAGAGGCTCACATCCTTACTCGTATAGGAGTCCACCTAAACAGAGGAAGGCACTTCCGGATGGTTCAGCTGAAATTTTGAAGCACCATCTGATGTCAACTTCATCTGATGGTAAAATCCAACAGTGGTTCCGGGAAGGTCTCGCAGGTCCTATGTTAAGCTCCGGCATGTGCACCGAAGTTTTTCAATTTGACATCTCATCAACACAAGGAGCTATTGTGGCAGCAGCATCATCAGCCAATGTTTCTGAAGAGAACCACCAGAATGCTAGTCGTCTCAGCAAGATTAGGAACAGAAGAATTCTCCATAGGCTCCCACTTGCTGGATCCAGTAGCAACGCAAGTGAAGAACAAGGAGGACGAAATTCACTGAATGATAACTTCCTTAGTAACAAGTCCAGGTCTTCCATGGTGGTTTCTGTGCTCGTTGATCCCAAAGAGGCTGGAGATTTTGATGGAATGATGAAGCCGAAGTCACTTTCTAGAATATTTGTGGTCGTGCTTGTGGACAGCATCAAGTACGTAACATATTCGTGTGTTCTTCCTCGCTCTTCTCCTCATCGAGTGACTGCTTGA	2136	0.456	MDSLLFADDDDTLFSEAFPSDFDLGLDGDFEINFDDLDNLRLPFNVDEFLFDDASVIPPSQSQIDDNRQGEANCDSNPTSDVARFSKSQSYPPPCLDNSGDQNPHGSHESKVSNFQSPESDSCARESSGGPISSQGSANGGSGGSDFADSPSPTRYERDFTSQVIDDENVKLDEIGKGSYLKRKMENNGGNAATPMENTTREPGVSIINEDNEKKKARLMRNRESAQLSRQRKKQYVEELEEKVKSMRSTIADLNSKISFVMGENTTLRQRLIAGGMCPPPPAPGMYTHSRMPTMPYSWVPYGPYVANPLGSQAPLVPIPRLKSQPPASASKSKTSERKKSDGKTKKVASVCFLGLLFFVLLFGGLAPLVNVKFDGLTDVTYGRSQYVSDRFYSHLGGKVWPVNGPMNRSEGYKGAESSSGRSSIFDRATDEKRDTHHKSGSDEFVHLGNTSEPLFASLYVPRNDKLVKIDGDLIINSVLASEKAKASQASHMAKNDKRETGLAISKYGDSALAIPEVGINRGSHPYSYRSPPKQRKALPDGSAEILKHHLMSTSSDGKIQQWFREGLAGPMLSSGMCTEVFQFDISSTQGAIVAAASSANVSEENHQNASRLSKIRNRRILHRLPLAGSSSNASEEQGGRNSLNDNFLSNKSRSSMVVSVLVDPKEAGDFDGMMKPKSLSRIFVVVLVDSIKYVTYSCVLPRSSPHRVTA	711

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele14g1338	711	MobiDBLite	consensus disorder prediction	627	648	-	-
	Lele14g1338	711	Coils	Coil	209	257	-	-
	Lele14g1338	711	Gene3D	-	212	274	-	-
	Lele14g1338	711	PANTHER	BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED	25	707	-	-
	Lele14g1338	711	MobiDBLite	consensus disorder prediction	426	444	-	-
	Lele14g1338	711	SUPERFAMILY	Leucine zipper domain	214	272	IPR046347	GO:0003700\|GO:0006355
	Lele14g1338	711	MobiDBLite	consensus disorder prediction	317	342	-	-
	Lele14g1338	711	SMART	brlzneu	210	274	IPR004827	GO:0003700\|GO:0006355
	Lele14g1338	711	MobiDBLite	consensus disorder prediction	628	648	-	-
	Lele14g1338	711	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	212	272	IPR004827	GO:0003700\|GO:0006355
	Lele14g1338	711	CDD	bZIP_HY5-like	215	265	-	-
	Lele14g1338	711	MobiDBLite	consensus disorder prediction	411	444	-	-
	Lele14g1338	711	Pfam	bZIP transcription factor	213	270	IPR004827	GO:0003700\|GO:0006355
	Lele14g1338	711	FunFam	bZIP transcription factor 49	213	275	-	-
	Lele14g1338	711	MobiDBLite	consensus disorder prediction	57	156	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele14g1338	Lele-ChrLele14	22190504	22193618	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele14g1338	23	711	bZIP Transcription Factor Family	AT2G40950	46.078	5.73e-143	433

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele14g1338		bZIP_1	1.3e-10	CL0018