Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1332 ATGGCACCGTCTTCCCCGGTTGAAGAGAATTTCCAAGACACTGAATCGCCGGAGACTCTAATCGGAAACGAGGGCCTCACAAAACGCATCCTCAAACCAGGACTCTCTTGGCAAACCCCATCTCCCGGAGACCAAGTCCAAGTTCATTTCAGAGGCCAGGTTCTCAATGGAGCGTCCCTTAAATCAAATCACGACAAAGCGACCCCATTTCGCTTCAACTTAGGCCAACGTGAAGTTATCAGAGGTTGGGATGAAGGAGTTGCCACCATGAAAAAGGGGGAGAGAGCAGTTTTCAAAATACCACCGAACTTGGCGTATGGGGAGAAAGGTTCTCCACCATTGGTTCCTCCGAATGCGACTCTCGTCTTTGAGATTGAGATGCTGTCTTGGATTACCATCAGGGACTTGACCGGCGATGGAGGAATCCTGAAGAAGATAATAAGGGAGGGAGAGGGATGGGAGACTCCTAAAGACGCCGACGAGGTCTTAGTGAAATATGAAGCAAAGCTAGAGAATGGAACGCTTGCTCATGAGTCTAATGAAGGTGTAGAGTTTAATTTAAGTGATGGGTATCTTTGTCCTGCCATGAGCATAGCATTGAAATCGATGAGAAAGGGGGAAGAAGCAGAGCTCAGTTTAAGATTCTTTTATGGCTTGATACAAAATTCAAGTAGAACCAGTGAAACGAAGGGCAGTGCCCAACCAGATTCTAATTTAACAAGTCTCAGACTAGAGCTGGTATCATGGAAAACTGTAGTCGATGTCACAGGAGATGAGAAGATACTTAAGAAGATCGAGAAAGCTGGAGAGGGATTTCAGCGTCCTAATGAAGGATCACAAGTGAAAGTAATATATACGAGTAAACTAGAAGATGGAACAATTATTGAGAGGAAAGGATCAGAGGAAGAACCTTTTTTGTTCACAACTCAGGAAGAACAAGCACCTGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGCAAGCCACTGTGGCTGTCATGGCTGAATATTTGTCTGATAAAAATACTTTTCCCACCACCCCAGCAAATAAAGTCCTATATTATGAGGTCCAATTGGTTGATTTAATCAAGGAGAAGCCATTTTGGAAAATGGACAATCAGGAGAAAATAGAAGCTTGTGAGAGGAAGAAGCATGAAGGAAACTTATTGTTCAAGGCTGAAAAGTTCAGGCGTGCATCCAACAAATATGAAAAGGCTGTAAAATGCGTTGAGTTTGATCACTCATTCAGTGATGATGAGAAACGTCAAGCCAATGCGTTACGGATATCTTGTTATTTGAACGATGCTGCTTGTAAACTTAAACTGGGAGATTATAGTGAAGCTTCAAAACTCTGTACTAAGGTTCTGGAACAAGATCCATTAAGTGTGAAGGCACTATATAGAAGAAGCCAAGCATACCTGAAAACATCAGAGTTAGAGAAAGCTGAGGCTGACATTAAAAGAGCCCTCACTATTGATCCAAACAACAGAGACATGAGAGTTGAGTACAGGGAGCTGAGGCTTAAGCAAAAGGAATACAGCAGATACGAAGCTGACATCTTCGGCACAATGCTTTCAAAGATGGGCTAG 1596 0.4323 MAPSSPVEENFQDTESPETLIGNEGLTKRILKPGLSWQTPSPGDQVQVHFRGQVLNGASLKSNHDKATPFRFNLGQREVIRGWDEGVATMKKGERAVFKIPPNLAYGEKGSPPLVPPNATLVFEIEMLSWITIRDLTGDGGILKKIIREGEGWETPKDADEVLVKYEAKLENGTLAHESNEGVEFNLSDGYLCPAMSIALKSMRKGEEAELSLRFFYGLIQNSSRTSETKGSAQPDSNLTSLRLELVSWKTVVDVTGDEKILKKIEKAGEGFQRPNEGSQVKVIYTSKLEDGTIIERKGSEEEPFLFTTQEEQAPEGLEKAIMTMRKGEQATVAVMAEYLSDKNTFPTTPANKVLYYEVQLVDLIKEKPFWKMDNQEKIEACERKKHEGNLLFKAEKFRRASNKYEKAVKCVEFDHSFSDDEKRQANALRISCYLNDAACKLKLGDYSEASKLCTKVLEQDPLSVKALYRRSQAYLKTSELEKAEADIKRALTIDPNNRDMRVEYRELRLKQKEYSRYEADIFGTMLSKMG 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1332 531 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 43 131 IPR001179 GO:0003755
Lele14g1332 531 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 154 224 IPR001179 GO:0003755
Lele14g1332 531 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 38 128 IPR001179 GO:0003755
Lele14g1332 531 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 274 362 IPR001179 GO:0003755
Lele14g1332 531 FunFam Peptidylprolyl isomerase 370 525 - -
Lele14g1332 531 SUPERFAMILY TPR-like 375 527 IPR011990 GO:0005515
Lele14g1332 531 ProSiteProfiles TPR repeat profile. 465 498 IPR019734 GO:0005515
Lele14g1332 531 PANTHER PEPTIDYLPROLYL ISOMERASE 12 129 - -
Lele14g1332 531 Gene3D - 133 250 IPR046357 GO:0003755
Lele14g1332 531 Gene3D - 2 132 IPR046357 GO:0003755
Lele14g1332 531 SUPERFAMILY FKBP-like 254 384 - -
Lele14g1332 531 SUPERFAMILY FKBP-like 136 217 - -
Lele14g1332 531 FunFam Peptidyl-prolyl cis-trans isomerase 18 131 - -
Lele14g1332 531 Gene3D Tetratricopeptide repeat domain 368 524 IPR011990 GO:0005515
Lele14g1332 531 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 159 250 IPR001179 GO:0003755
Lele14g1332 531 SMART tpr_5 465 498 IPR019734 GO:0005515
Lele14g1332 531 SMART tpr_5 382 415 IPR019734 GO:0005515
Lele14g1332 531 SMART tpr_5 431 464 IPR019734 GO:0005515
Lele14g1332 531 Gene3D - 251 366 IPR046357 GO:0003755
Lele14g1332 531 SUPERFAMILY FKBP-like 17 132 - -
Lele14g1332 531 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 278 365 IPR001179 GO:0003755
Lele14g1332 531 Pfam Tetratricopeptide repeat 442 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1332 Lele-ChrLele14 22147400 22150220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1332 18 530 Calmodulin-binding Proteins AT5G48570 52.308 0.0 558