Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1321 ATGGGGCATAAGAAAATATTCGGGGCTTCCCTCACCCTCTCTCTCCTCAAAAGAACACACAAGGCCTTGGTTTGGGAAAAGCCGGAAAGGCCTGAACTTTGGCTCAAATTCCAGCTCAGAAACAAGCTTAAATCTGATAAACCCCTTTCAGGAAACGTGTTATGTGCCGGCATCGACTCCAAATTTCGTCATTTCATGGCTTCCTGTATTTTGGGTCAAGACTCTAATCCAGCACATGGGTCCTTTGATAAGTCTAGGGTTTTGAATGTTAAGCCATTGCGAACTCTTGTTCCTATATTTCCTTCACCATCTAATGCCTCTTCGTCTTCAAATTCACAAGGCGGGGCACCCTTTATTTCAGTCTCTCCGTCTGGCCCCTTCCCCTCTGGCATTTCCTCCTTCTACCCCTTCTTCTTCTCTCCAGAGTCTCAGAGATTCCCAGAACAAAATTTTCAAACCCCAGCAGCTGGTGTGCCTGCAGTTCCACTTAATTCATTTAGGACACCAGCCCCAAGAGCTAAGGCTACTACTAATGGATTTGCAGGGTCATCTAGAAGAAGCAAAAAGGGTTTCACGAATGACGATGACTATAGTAATAGCCATCAAATCAATTTTGAGGTCAATGAAACTGATGCAGAAGACGGAAGCCAGGATAGAAGGCTTAGATCGAAGAAGAAAAAAGGAAGGCAGGGAGGCGACTCTGCAGCAGTGGAGGTTGATTTGGATAAAGTATCTAATGATACTCTCAAGTCAATTAATCCAATTGTTTTTGATGTCTTGAATCAACCAGACGGTAACAAAGATGCAGTTTCATATACACTTATGATATTTGAAGTGTTAAGAAGGAAGATCACTCAAATTGAAGATCTGAAAGATGGAAATCCTGGAGTGGCAAGACGACCTGATTTGAGGGCAGGCACAATTATGTTGAGTAAAGGGGTTCGGACAAATAGTAAGAAACGTATTGGAGCTGTTCCTGGTGTTGAAATTGGGGATATTTTCTTTTTTAGGATGGAATTGTGTGCGGTGGGGTTGCATGCACCATCTATGGCTGGAATTGATTACATGAGTGTCAAATTCAGTCAAGAAGAAGAGCCATTAGCTGTAAGTATTGTCTCATCTGGAGGATATGAAGATAATACAGAGGATGGGGATGTTCTGATTTACAGTGGCCAAGGTGGGGCTAATGGAAGTGATCAAAAGCTTGAAAGAGGTAATCTTGCATTGGAAAAGAGTCTGCATCGAGGTAATGAAGTTAGAGTAATTAGAGGTCTCAAGGACAGTACTAACCCTATGGGGAGGATATATGTTTATGACGGTCTTTACAAGATCCAACACTCATGGGTAGAAAAAGGAAAATCAGGTTTCAGTGTATTTAAGTATAAATTAGTCAGGCTGCCTGGGCAGGCTGAAGCATACATGACATGGAAATCCATTCGGCAATGGACCGAGAAGTCTAATTCAAGAGTTGGGGTTATATTGCCGGATCTTACTTCTGGGGCTGAAAAGGTTCCTGTTTGTCTTGTGAATGATGTTGATAGTGAGAAGGGCCCTGCATATTTCACCTACTGCCCTTCTCTTAGGAATCTGAAGCCGGCAAATCCCATAGATCAATCTGCTGGATGTAATTGTACTGGTGGATGCCATCTCAGCAACTTTAACTGTTCTTGCATTCAAAAGAATGGAGGTCATCTCCCGTATTCTGCAAATGGGGTACTCTTGGACTTAAAATCTGTGATATATGAGTGTGGTCCTTCATGTCAATGCCCTCCAAATTGTCGAAATAGGGTTTCTCAAGGTGGCTTGAAAGTTCGTTTGGAGGTTTTTAAAACTAAGAATAAAGGGTGGGGTTTGAGATCCTGGGATCCTATTCGTGCAGGAGCTTTTATATGCGAGTATGCAGGTGAAGTCATAGATAATGCTCGAGTGGAGGAGCTTGGTGTTGAAAATGAAGATGATTACATATTTGACTCTACTCGCATTTATCAGCAGCTTGAAGTTTTTCCTAGTGAAACTGAAGCTCCGAAGATCCCGTATCCTCTCTATGTAACAGCAAAGAATTATGGGAATGTTGCTCGGTTTATGAACCACAGCTGTTCTCCAAATGTATTCTGGCGCCCTGTTGTGCGTGAAAACAAACATGAATCTGATCTCCACGTTGCTTTCCATGCAGTCAGACATATCCCTCCCATGACCGAGTTGACACATGATTATGGAATAGTTCTTCCTCTCAAAGCAGGTCAGAGGAAAAAGAAATGCCTATGTGGATCAGCAAAATGTAGGGATTACTTTTGGAAGTATAGTGATTCTGTAGCCAAGAGCCGGTTTGGCAAGCACAATGCAAAGAATGCAAAAGAAAATGTTTTTGTTAATTTGACAGACAGTATTAGCAAGGAACTTTAA 2403 0.4232 MGHKKIFGASLTLSLLKRTHKALVWEKPERPELWLKFQLRNKLKSDKPLSGNVLCAGIDSKFRHFMASCILGQDSNPAHGSFDKSRVLNVKPLRTLVPIFPSPSNASSSSNSQGGAPFISVSPSGPFPSGISSFYPFFFSPESQRFPEQNFQTPAAGVPAVPLNSFRTPAPRAKATTNGFAGSSRRSKKGFTNDDDYSNSHQINFEVNETDAEDGSQDRRLRSKKKKGRQGGDSAAVEVDLDKVSNDTLKSINPIVFDVLNQPDGNKDAVSYTLMIFEVLRRKITQIEDLKDGNPGVARRPDLRAGTIMLSKGVRTNSKKRIGAVPGVEIGDIFFFRMELCAVGLHAPSMAGIDYMSVKFSQEEEPLAVSIVSSGGYEDNTEDGDVLIYSGQGGANGSDQKLERGNLALEKSLHRGNEVRVIRGLKDSTNPMGRIYVYDGLYKIQHSWVEKGKSGFSVFKYKLVRLPGQAEAYMTWKSIRQWTEKSNSRVGVILPDLTSGAEKVPVCLVNDVDSEKGPAYFTYCPSLRNLKPANPIDQSAGCNCTGGCHLSNFNCSCIQKNGGHLPYSANGVLLDLKSVIYECGPSCQCPPNCRNRVSQGGLKVRLEVFKTKNKGWGLRSWDPIRAGAFICEYAGEVIDNARVEELGVENEDDYIFDSTRIYQQLEVFPSETEAPKIPYPLYVTAKNYGNVARFMNHSCSPNVFWRPVVRENKHESDLHVAFHAVRHIPPMTELTHDYGIVLPLKAGQRKKKCLCGSAKCRDYFWKYSDSVAKSRFGKHNAKNAKENVFVNLTDSISKEL 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1321 800 Pfam SET domain 615 739 IPR001214 GO:0005515
Lele14g1321 800 Pfam Pre-SET motif 498 596 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele14g1321 800 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 164 759 - -
Lele14g1321 800 Gene3D - 306 486 IPR036987 -
Lele14g1321 800 SMART preset_2 494 588 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele14g1321 800 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 31 778 IPR025794 GO:0016571
Lele14g1321 800 SMART set_7 604 745 IPR001214 GO:0005515
Lele14g1321 800 Gene3D SET domain 487 765 IPR046341 -
Lele14g1321 800 SUPERFAMILY SET domain 482 745 IPR046341 -
Lele14g1321 800 MobiDBLite consensus disorder prediction 196 210 - -
Lele14g1321 800 SUPERFAMILY PUA domain-like 305 484 IPR015947 -
Lele14g1321 800 ProSiteProfiles YDG domain profile. 323 465 IPR003105 -
Lele14g1321 800 ProSiteProfiles SET domain profile. 604 739 IPR001214 GO:0005515
Lele14g1321 800 ProSiteProfiles Pre-SET domain profile. 540 601 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele14g1321 800 SMART G9a_1 318 469 IPR003105 -
Lele14g1321 800 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 306 484 - -
Lele14g1321 800 MobiDBLite consensus disorder prediction 162 235 - -
Lele14g1321 800 Pfam SAD/SRA domain 322 469 IPR003105 -
Lele14g1321 800 ProSiteProfiles Post-SET domain profile. 749 765 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1321 Lele-ChrLele14 22092922 22099340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1321 76 764 Su(var)3-9 homologs AT1G73100 48.671 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele14g1321 SAD_SRA 3.2e-50 CL0178