Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1298 ATGAAACTTCCGCCTAATCGAAGATGTATCAACTGCAATAGTCTGGTTCCGCAATATGTCTGTACGACTTTTTGGACCTTCGTTTGCATGACATGCAGTGGGATACATCGTGAGTTTACTCATCGAGTTAAGTCTGTATCAATGGCAAAATTCACTTCTCAAGAAGTAGAATCTCTTCAAAATGGTGGCAACCAGCGTGCAAGGGACATATATTTGAAAGATTGGGATTTCCAAAGGCAGCGTATGCCAGATAGCAGTAATGTTGACAAAATAAGGGAGTTTATAAAGAATGTGTACAGTGACCGAAGATATGCTGGAGCAAGGTCCTCTGACAAGCCTCCAAGAGATACTCAGAGCCCCAGAATCCAAGGAGATGACACAAGGCGGGCTAGCTCTTATCATTCATATTCTCAAAGTCCTCCATATGATTATCAATATGAAGATCGGCGGTATGGAAGACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGATAAAGGAGGTCGCTATGAAGGGAAGATGTCTAGTATTATGTATAGTCCTGGGCGCTTCAGTGACCATGCGTCTGAGGATGGCTTTGCTATTGAGGGGTCTGGTACAATAATTTCCGACTATTCTGTGTCTAGTGCTGGTGCTGTGCAATCTCCTATGTTTCATAGGGACATGCGAAGTAGTCTGGTCAATCAGCGTCCTAGTGCTGGTTCAAGTGAAGATGTATGGTCTCCATCATGGTATACGTCTCTGGAAACAATTGTCAAGGGTGATTCAGATGGACATCATCCACAGAGAACCACACCACGGGGATCAACTGACTGCAATCCATCATCCCATAGTTCTTTCAGTTCTGTTGGTTTAGATTTATCTGCAGAGCCTGTCCAAGCTTTTGGATCCAATCAGGATAAGGTGTCTGCCATACCAGTAGCACAACAATCACGTCCAGCAAGATCAGTCAGCTTGGATCTTTCAAAGGAAGCTGTGGCATCTCAGCCATTGTCCTCCTTAACGCCACCTATTGATCTTTTTGAGTTTCCAGTATCATCTCAGGCTCCATCAGTGGATTTGTTTGAACCATCTATTTTGTCTTCAGCTCCATCTTCTAATGAAAATCAACCGTTACAAACATCACAGTCCTCATCTATTGACTTCTTTGCGGATGTTTCTAAGAAACAACCTGCTGCTTCATCAGATGAGAAGTCACCAGAGTTCTTTGTTCCTAAAAATGAAGGATGGGCAACATTTGATATCCCTCAGCACACAGCATCTCCTGCACAAGGTGAAATTCCAACAGGAGTTCCTTCAACTGACAAGTCTTTGCTGGAGTTATTGGATCCATTTTCAACTGCAAATGCCAACAAGCAGTGGCCATCTTTTGACACTTCTGGTGTTCATGAACCTTCTACCACCTCTAATGCATGGCATGGTGGTGTGCAGAATGGAGAACAAGCTTCCATAACGGCAGCAAATGCTCAACCATGGAATGCATTTGAAGATTCTGGTTCCCACCTTTCTGTAGATGCTGTTAATCAAGGGTTGCAACTGCATAATCTTCCATCCAGTGATGATCAATTTTTAAGCTCAAAAGTCTCTGAGGGTTCCAAAGGCGGGGTGCAAGACTTTGCCCCTATTTGTGCATTCGATGACAATATTCAATCAGTTGTTAGTGGTTTACCTTGTTCTCCAACTGTGCTTCCTCTGATGGAAGAGTCTCAACTCAGTGCAACCAACCAGAAATCAACTAATCCATTTGATCTTCCCTTTGAATCTGATGTAGAGCACAACAATATGTTCCTTGATCTGAGTTCATTGCAAGCTGCTCTGCCAGATTCCCAGCTGGCTCCTCCATACCATGGAGGTAATGGTGTAGCTGAACCATGGCTCCCGCAAAGTGTGACCCCATATATTTCTTCTTCAGCAGAAGGAGGTCTTACATTCATGGCTGCGCAACCACCAAGCTCTCAAATACCGAACATCCAGACGCAAGGGCCAGTTGCATCTTTTGGGGACAATCCTTTTGCATACAATTGA 2025 0.4415 MKLPPNRRCINCNSLVPQYVCTTFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVESLQNGGNQRARDIYLKDWDFQRQRMPDSSNVDKIREFIKNVYSDRRYAGARSSDKPPRDTQSPRIQGDDTRRASSYHSYSQSPPYDYQYEDRRYGRQAAALTRKPGSDKGGRYEGKMSSIMYSPGRFSDHASEDGFAIEGSGTIISDYSVSSAGAVQSPMFHRDMRSSLVNQRPSAGSSEDVWSPSWYTSLETIVKGDSDGHHPQRTTPRGSTDCNPSSHSSFSSVGLDLSAEPVQAFGSNQDKVSAIPVAQQSRPARSVSLDLSKEAVASQPLSSLTPPIDLFEFPVSSQAPSVDLFEPSILSSAPSSNENQPLQTSQSSSIDFFADVSKKQPAASSDEKSPEFFVPKNEGWATFDIPQHTASPAQGEIPTGVPSTDKSLLELLDPFSTANANKQWPSFDTSGVHEPSTTSNAWHGGVQNGEQASITAANAQPWNAFEDSGSHLSVDAVNQGLQLHNLPSSDDQFLSSKVSEGSKGGVQDFAPICAFDDNIQSVVSGLPCSPTVLPLMEESQLSATNQKSTNPFDLPFESDVEHNNMFLDLSSLQAALPDSQLAPPYHGGNGVAEPWLPQSVTPYISSSAEGGLTFMAAQPPSSQIPNIQTQGPVASFGDNPFAYN 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1298 674 CDD ArfGap_AGFG 1 104 - -
Lele14g1298 674 SMART arf_gap_3 1 112 IPR001164 GO:0005096
Lele14g1298 674 MobiDBLite consensus disorder prediction 124 142 - -
Lele14g1298 674 MobiDBLite consensus disorder prediction 104 123 - -
Lele14g1298 674 MobiDBLite consensus disorder prediction 252 283 - -
Lele14g1298 674 PRINTS HIV Rev interacting protein signature 6 25 IPR001164 GO:0005096
Lele14g1298 674 PRINTS HIV Rev interacting protein signature 43 64 IPR001164 GO:0005096
Lele14g1298 674 PRINTS HIV Rev interacting protein signature 25 42 IPR001164 GO:0005096
Lele14g1298 674 Pfam Putative GTPase activating protein for Arf 2 105 IPR001164 GO:0005096
Lele14g1298 674 SUPERFAMILY ArfGap/RecO-like zinc finger 2 105 IPR037278 -
Lele14g1298 674 PANTHER ARFGAP/RECO-RELATED 1 672 IPR044820 GO:0005096
Lele14g1298 674 MobiDBLite consensus disorder prediction 265 283 - -
Lele14g1298 674 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 112 IPR001164 GO:0005096
Lele14g1298 674 Gene3D Arf GTPase activating protein 1 114 IPR038508 -
Lele14g1298 674 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 117 - -
Lele14g1298 674 MobiDBLite consensus disorder prediction 104 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1298 Lele-ChrLele14 21979536 21984843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1298 1 120 C2H2 Transcription Factor Family AT3G07940 29.231 6.84e-09 55.8