Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1297 ATGGGAAGACCTCCTTGCTGTGACAAAGTTGGGATCAAGAAGGGACCATGGACACCTGAGGAGGATATCATCCTTGTTTCCTACATCCAAGAGCATGGCCCTGGAAACTGGAGATCAGTGCCTACTAATACTGGGTTGTCAAGGTGCAGCAAAAGTTGCAGGCTGAGATGGACTAACTACCTCAGGCCAGGAATCAAGAGAGGCAACTTCACACCTCATGAGGAAGGGATGATAATTCATTTGCAGGCTCTTCTGGGAAACAAATGGGCAGCCATAGCTTCGTACCTACCACAAAGAACAGATAATGATATAAAGAATTATTGGAACACACATCTAAAGAAGAAGCTGAAGAAATTTCAAGCCGCCTTGGACCCCCACCTAGTGTCACCGGACTCAACTACGTCTGCTCAGCTTGCATCTAAGAGCTTTCATGACAGAACAAGTTTAGATATGAGCAGCACTTCATCATCTCTTATGCTTAGTCATCAGTCTCAGACGTCACAGTCACAGTCTCAGTCCTCGTCCTCCACCTATGCCTCAAGCACTGAGAACATCTCACGCCTCTTACAAGGTTGGATGAGATCATCCCCAAAACCAGACACTAGTAGTCTTCTCCAAGTAACCAAAGACAAAGACCTTCAAAACAACAACAAAGTTAACAGCTTCCAAAACAGCAATAAGCCGATGATGGTGAAGTCTGAATCAGTACCTGCTGCTTTAAATTTTGTGACGTCGTCCTATCATCATCATCAAGCAAAAGATGAGCAAGAGTGTGGAGATATGGTGTCCCATGAAGAGTTCGATTCCATTCTGTCGTTCGAGAACCTAAACAATGCTGCTTGGGACAAGTCCACTTGTGATTCTGAGAAGGTTCATCATGATAAGCAGAGATCAGATAGCAATAATGCTCCCCCATTATCGTTTCTTGAGAAGTGGCTGTTTGAAGAAAATGTGGGCCATGAGGAGATGATGGAACTATCACCTATGTTCTAA 993 0.4451 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQAALDPHLVSPDSTTSAQLASKSFHDRTSLDMSSTSSSLMLSHQSQTSQSQSQSSSSTYASSTENISRLLQGWMRSSPKPDTSSLLQVTKDKDLQNNNKVNSFQNSNKPMMVKSESVPAALNFVTSSYHHHQAKDEQECGDMVSHEEFDSILSFENLNNAAWDKSTCDSEKVHHDKQRSDSNNAPPLSFLEKWLFEENVGHEEMMELSPMF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1297 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele14g1297 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele14g1297 330 Gene3D - 13 66 - -
Lele14g1297 330 MobiDBLite consensus disorder prediction 147 180 - -
Lele14g1297 330 Gene3D - 69 141 - -
Lele14g1297 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 227 - -
Lele14g1297 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele14g1297 330 FunFam Transcription factor MYB60 68 139 - -
Lele14g1297 330 FunFam MYB-related transcription factor 13 66 - -
Lele14g1297 330 MobiDBLite consensus disorder prediction 193 228 - -
Lele14g1297 330 SMART sant 66 114 IPR001005 -
Lele14g1297 330 SMART sant 13 63 IPR001005 -
Lele14g1297 330 CDD SANT 16 61 IPR001005 -
Lele14g1297 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele14g1297 330 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele14g1297 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele14g1297 330 CDD SANT 69 112 IPR001005 -
Lele14g1297 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1297 Lele-ChrLele14 21976733 21978063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1297 1 119 MYB Transcription Factor Family AT5G62470 89.916 1.09e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele14g1297 Myb_DNA-binding 1.7e-15 CL0123