Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1286 ATGTCTCACAAGGATCTGGTTATCAAGCTATTTGGCCGGAAGATTCCCTTGCCGGAATGTCAGAATCTGGTGACCTCTCTATTGCCTCCTCAGATTCCGGCCAACTCCGGAACCATGGATGCTTGCAGAAGCTTGAAGGAAACAGCAGTGGAAAGAGTTTGTGCAGAGAACTCTGAGCAACAAGAGAATGCCTCTGATTTAGCTGCAAGTAAAGAAGGGTCACAACATAATCAGGTGGAAAATGAGCCCAAAGCCAATCCCAAGACCATGGAAGATAGAGGGGAAACTAGTAGCACGGATCAGGATAAATCATTTAAGAAACCAGACAAGATTCTTCAGTGTCCGCGATGCAACAGTTTGGACACAAAGTTTTGTTATTTCAATAACTACAATGTCAACCAGCCTCGACATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCTGGTGGAACGATGAGAAATGTTCCGGTGGGTGCTGGGAGACGAAAGAACAAGCACCTAGCCTCTCAGTTTCGACACATCATAGTGTCCTCTGATGGAATTTCAACCTCTAGGTTGGAAACCACAGACTCATCTAATCACCAACTCATCTCATCTCCTGAATCTTCAGCTGCTTTCAGGTCTTCAAGGGCAATGGATAATGGTATTGTATTGAAATTTGGTCCAGATGCCCCTCCTCTCTGTGAATCCATGGAGGCAATGCTTACTATTGGAGACCAGAAAAGGAAAGTTGATGCAGAAAATGGGAAAGAAGCATCTTTATGTGGATCTTCAGTACCAAATAGTAGTGCTACAGAACTTGTTATGCAAAAGGAGCAGTGTGTTTCTAATCAGCTTAGCACATCAAATCAAATTCAGTGTTACCCTGTTCCTCCACTGTTGTTTCCCTGGAATCCAGATTGGAACAATGTTGTTTCTATGGCCGCAATTCATCAATCTTCAGCGCCAATGCAGTGGTATCCTACGCCAATGGTGGCAGTTCCCGGCATGTGCCAACCCGGCATTCCTTTACAATATGCACCACCATCATATTGGTCTGCTGGCACCGGGACAGTCTCAATAGGGTCTAACGGTTGTCTTTCGCCGTCATCGTCAACAAGTAATAGCTGCTGCTCAGGCAATGGCTCTCCAGCATTGGGAAAACACTCTAGAGATACAGTTTTCGTAGATGAAGAGAAATCAGAGAAGTGTGTTCTGGTTCCAAAGACTCTTAGGATTGATGATCCAAATGAAGCTTCAAAAAGTCCTATATGGGCTAAATTAGGTATAAAGCCTGATAAGAAGGAGTCTGAATCATCAGAAGGTCGTAGTTCAAAGAAATTGGAGGCTGAAGAAGATGGAAAAGATCGTGTGTTGGGTGTTTCTCAAATTTTGGAAGCTAACCCAGCTGCTATCTCTAGGGCACATGCATTCCAGGAGACTATATAA 1428 0.4426 MSHKDLVIKLFGRKIPLPECQNLVTSLLPPQIPANSGTMDACRSLKETAVERVCAENSEQQENASDLAASKEGSQHNQVENEPKANPKTMEDRGETSSTDQDKSFKKPDKILQCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVSSDGISTSRLETTDSSNHQLISSPESSAAFRSSRAMDNGIVLKFGPDAPPLCESMEAMLTIGDQKRKVDAENGKEASLCGSSVPNSSATELVMQKEQCVSNQLSTSNQIQCYPVPPLLFPWNPDWNNVVSMAAIHQSSAPMQWYPTPMVAVPGMCQPGIPLQYAPPSYWSAGTGTVSIGSNGCLSPSSSTSNSCCSGNGSPALGKHSRDTVFVDEEKSEKCVLVPKTLRIDDPNEASKSPIWAKLGIKPDKKESESSEGRSSKKLEAEEDGKDRVLGVSQILEANPAAISRAHAFQETI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1286 475 ProSiteProfiles Zinc finger Dof-type profile. 112 166 IPR003851 GO:0003677|GO:0006355
Lele14g1286 475 MobiDBLite consensus disorder prediction 55 84 - -
Lele14g1286 475 MobiDBLite consensus disorder prediction 421 449 - -
Lele14g1286 475 MobiDBLite consensus disorder prediction 85 107 - -
Lele14g1286 475 MobiDBLite consensus disorder prediction 417 449 - -
Lele14g1286 475 MobiDBLite consensus disorder prediction 55 107 - -
Lele14g1286 475 ProSitePatterns Zinc finger Dof-type signature. 114 150 IPR003851 GO:0003677|GO:0006355
Lele14g1286 475 PANTHER CYCLIC DOF FACTOR 2 5 474 IPR045174 GO:0003700|GO:0006355
Lele14g1286 475 Pfam Dof domain, zinc finger 109 166 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1286 Lele-ChrLele14 21918402 21920827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1286 5 474 C2C2-Dof Transcription Factor Family AT5G39660 35.249 3.09e-69 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele14g1286 zf-Dof 2.7e-32 No_clan