Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1252 ATGGCAGCCGAGAAGAGAGAATTAGGGATCAACAAAACTTCCAATGCTAACTCTAACAACGCTAACCTCGAGCAAATAGTAGAATCTTCACCTCCTTTGGCTTCCGTTGGCAACGATACTTCTAATAATGAGGCTGAAGAACGACAGGCTCGTGACCTCAAAGCGGGTCTTCATCCCCTAAAGCACAAATTTGTATTTTGGTACACCCGCCGTACACCTGGAGTTCGAAATCAGACATCATACGAAGACAACATAAAGAGAATTGTTGATTTCAGTACGGTTGAAGGCTTTTGGGTTTGCTATTGCCATCTAGCTCGCCCTTCCTCCTTGCCAGTTCCTACAGATTTGCATCTTTTTAAGGAAGGCATTCGTCCTTTATGGGAGGACCCAGCTAATTGTAATGGTGGTAAGTGGATCATACGATTCAAAAAGGTCGTTTCAGGACGCTTTTGGGAGGACTTGGTTCTTGCCTTAGTAGGGGACCAGCTTGATTATGGGGATAACATATGTGGCGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTATGGAATCGCAATGCATCTGATCATCAGGCCGTGATGGCTCTGAGGGATTCAATTAAACGTCACTTAAAGCTTCCTCATAACTATGTCATGGAATACAAGCCCCATGATGCCTCTTTGCGAGACAATTCATCCTACAGAAACACCTGGTTGAGAGGATAG 714 0.4426 MAAEKRELGINKTSNANSNNANLEQIVESSPPLASVGNDTSNNEAEERQARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKRIVDFSTVEGFWVCYCHLARPSSLPVPTDLHLFKEGIRPLWEDPANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHNYVMEYKPHDASLRDNSSYRNTWLRG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1252 237 ProSitePatterns Eukaryotic initiation factor 4E signature. 115 138 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lele14g1252 237 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 230 IPR023398 -
Lele14g1252 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 41 226 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lele14g1252 237 MobiDBLite consensus disorder prediction 1 48 - -
Lele14g1252 237 FunFam Eukaryotic translation initiation factor NCBP 31 230 - -
Lele14g1252 237 SUPERFAMILY eIF4e-like 51 233 IPR023398 -
Lele14g1252 237 MobiDBLite consensus disorder prediction 10 43 - -
Lele14g1252 237 Pfam Eukaryotic initiation factor 4E 59 217 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1252 Lele-ChrLele14 21709683 21712497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1252 40 237 Eukaryotic Initiation Factors Gene Family AT5G18110 82.323 1.63e-124 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1252 14 21709683 21712497 Lele15g1100 15 6369726 6372372 hybridization
Lele14g1252 14 21709683 21712497 Lele16g1125 16 6336458 6339250 hybridization