Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1243 ATGCCCTTCGTCCCCAGGTTCGATCAGACGATCCCGGAACAAGTCTGGGAAGCCGCATTTGCATTCCCTATAAAAGAAAAACACAAAAACAAGTTTAACGAGACACAGCCATCGAGAGAAAAGACCAACACAGTAGTGGGACGAAAGAAGGACCATCCAGCGATTAAACTCACCATTGTCCTATTCTTCTCCCATCTTAATACTAACGTTTCCACAAAAACAAAGCAACAAAAAGCTAATCCCATATCGCCACCTAATAACATTTCTGATGGAGTCGATCCGTTAGTATTACATAAGATTGTTGAAATTTTCAGAGCGACTCTAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGGAGATCAAAGCGGCTTGGTGATCTTCAACCTGCCCCACAACCTATTGAGGAGAACTGCGCACAAACTGCTCCAAACAAGACCAGAAGGAGAGTTGGTGGTGGAAGAGGAAGAGGTGGGAATGCCCCTGCTGTAGCAAAAGGAACTTCGCCAGCAGTGCCCACAAGACGAACTGCAGCTGGTAGGGGCCGGGGAGGTAGATTGGTTGATCTGGTTCCTGAACCTGTTGCGCTTGGGGCCCCTGAACCTGTTCTTAATCGTGAAGACGTACCAGCCAATAATAAGATTTTGATGGCGGGTGGAAGTGCAGACAAGGCGGCAGGAGCTGAAGAGGAGGCATGCACAACCCCTGTTCCTGAAACGGTACAAGTTGGTAGTTCTCCTTTATATAAGATAGAAACGAAGTTGGGTAAGGGTGGTTTCGGTCAAGTATATGTTGGCAGAAGGGTAAGTGGTGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCGCTGAAGCTTGAACATAGAAATAGTAAAGGTTGCAATTATGGGCCTCCTTACGAGTGGCAAGTCTATAATACTCTGAACGGTTGTTATGGCATTCCCTGGGTTCATTACAAGGGTCGCCAAGGAGATTTCTATATACTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGCCAGTCGATGTCACCAAATATGGTTGCGTGCATTGCAGTGGAGGCAATATCGATTCTTGAGAAGCTCCATATGAAAGGGTTTGTGCATGGAGATGTTAAACCAGAGAACTTTTTACTTGGCCAACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCTAAATGGAAGGACACATCTGGTCAGCATGTTGAATATGATCAAAGGCCTGACGTGTTTAGGGGAACCATAAGATATGCCAGCGTACATGCACATTTAGGTAGGACTGGAAGTAGGAGGGACGATCTTGAGTCCCTGGCGTATACATTAATATTTCTTATAAAAGGGAGGTTGCCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAACTATTCCAAGCTTATATCATTATTTGACAGCTTGATTGAACCATCTTCTCAGTTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGAGGGCTAGAATGCTTATAAATCTAGAAGATGATGAGCAGCCAAAAAAGAAAGTGCGATTGGGGAATCCTGCTACTCAGTGGATATCAGTGTATAATGCACGGCGTCCCATGAAACAGAGATATCACTATAATGTGTCAGACGGTAGGCTTCAACAGCATGTAGACAAGGGGAATGAGGATGGATTATATATCAGCTGTGTGGCCTCGTCCACAAATCTTTGGGCCCTAACCATGGATGCAGGAACGGGTTTCTCCTCTCAGGTCTATGAGTTATCACCATTTTTCCTGCACAAGGATTGGATTATGGAACAATGGGAGAAAAATTACTATATTAGTTCTATAGCTGGGGCAACAAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACTCCGTACACCCAGCAGTCCTACAAAGTAAGTGAATCATTTCCTTTCAAATGGATCAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACCACTGCTGGCAGTCGATGGGGCGTTGTTATGTCCAGGAATGCAGGGTATTCTGATCAGGTTGTGGAGCTGGACTTCTTATACCCAAGTGAAGGTATTCATCGGCGATGGGAGAGTGGTTACCGGATAACATCTATGGCTGCTACTGCTGATCAGGCAGCCTTCATTCTTAGCATACCGAAGTGCAAATTGCTCGATGAAACTCAAGAGACTCTACGTACCTCTGCCTTCCCTAGCACCCATGTGAAGGAAAAATGGACCAAGAATCTCTATATAGCCTCAATATGTTATGGGAGGACTGTTTGTTAG 2448 0.4498 MPFVPRFDQTIPEQVWEAAFAFPIKEKHKNKFNETQPSREKTNTVVGRKKDHPAIKLTIVLFFSHLNTNVSTKTKQQKANPISPPNNISDGVDPLVLHKIVEIFRATLVGYDLNGERMPELRSGARRSKRLGDLQPAPQPIEENCAQTAPNKTRRRVGGGRGRGGNAPAVAKGTSPAVPTRRTAAGRGRGGRLVDLVPEPVALGAPEPVLNREDVPANNKILMAGGSADKAAGAEEEACTTPVPETVQVGSSPLYKIETKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKLEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASKWKDTSGQHVEYDQRPDVFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPSSQLRPIRIDGALKVGQKRARMLINLEDDEQPKKKVRLGNPATQWISVYNARRPMKQRYHYNVSDGRLQQHVDKGNEDGLYISCVASSTNLWALTMDAGTGFSSQVYELSPFFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATADQAAFILSIPKCKLLDETQETLRTSAFPSTHVKEKWTKNLYIASICYGRTVC 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1243 815 Pfam Protein kinase domain 255 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1243 815 FunFam Casein kinase 1-like protein 227 574 - -
Lele14g1243 815 Gene3D Transferase(Phosphotransferase) domain 1 220 577 - -
Lele14g1243 815 ProSitePatterns Protein kinases ATP-binding region signature. 261 292 IPR017441 GO:0005524
Lele14g1243 815 SMART serkin_6 255 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1243 815 CDD STKc_CK1 255 528 - -
Lele14g1243 815 SUPERFAMILY Protein kinase-like (PK-like) 255 541 IPR011009 -
Lele14g1243 815 PANTHER CASEIN KINASE-RELATED 256 774 - -
Lele14g1243 815 ProSiteProfiles Protein kinase domain profile. 255 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1243 815 MobiDBLite consensus disorder prediction 152 192 - -
Lele14g1243 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1243 Lele-ChrLele14 21665363 21674613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1243 372 528 MAP Kinase Kinase Kinase AT5G50180 26.061 6.60e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele14g1243 Pkinase 5e-16 CL0016