Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1227 ATGGCCAGCCCACAGTCCCATTTACCTCCTGGTTTCAGGTTTCACCCTACTGACGAGGAGCTCATTCTTCACTATCTCAGGAAGAAGGTCGCCTCTTTGCCCTTGCCCGTCTCCATCATTGCCGAGGTTGATATCTACAAGTTTGATCCCTGGGACTTACCCGAGAAGGCGGCGTTTGGGGATAAAGAATGGTACTTCTTCAGCCCTCGAGACCGCAAGTACCCAAACGGGGCGAGGCCCAACAGGGCGGCTGCTTCAGGGTACTGGAAGGCGACGGGCACTGATAAGGCCATAGTGGCGTCGTTGCCTGGAGGAGGAGCGACGGGGAGCATGGGGGTGAAGAAGGCTCTGGTTTTCTACACTGGAAAACCCCCCAAGGGGGTCAAGACCAACTGGATCATGCATGAATATCGCCTCCTCCACAACACCAGAAACAGACACCTCAAGTTCCAAAACTCCTCCATGAGGTTAGATGACTGGGTTCTTTGCCGGATTTACAACAAGTCCAAATATGTAGCTGAATGTCCCACTGCTGAAGTAGAAACCTTGGTGGCTGACCAAGATCTCGCACATGAGCAGATGTTACCGAGCTCTCAATCTCCCCCTCCTCATCAAAATCTGATTTCTCAGAAATCGTTGTCTTTCTCGAACCTGTTAGATGCCATGGACTTCTCCATGTTGAGCAGCTTATTATCTGACAACTATTCCAACCCACCTGGGTTTGAATCTGCTGCTGCTAATTCTAACTCTGAGATTATCAATCTGGATGAACAATCATCCAAAAACGTTCATACCGACAACGTCTACTTGCTTCAGAGGACCCCCCAATTGAACCCCTCCGTCCAAAACATGGAAAACAACATGCATAAGTGTCAGATTTCAGGCCTAGACGAGGATGTTTCATACCCATCCAAGAGGTATCTGACCTCTTCCTGCAGTTTCCCTAATAACAATACGAACCAACTCGAGAACTTCCTCCTCAAGCGATCGTTGTTGAACCAGCAGTTACTTCTCGGGCCTCAGGATCTTCGCTTTCAGGGATAA 1044 0.4952 MASPQSHLPPGFRFHPTDEELILHYLRKKVASLPLPVSIIAEVDIYKFDPWDLPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKAIVASLPGGGATGSMGVKKALVFYTGKPPKGVKTNWIMHEYRLLHNTRNRHLKFQNSSMRLDDWVLCRIYNKSKYVAECPTAEVETLVADQDLAHEQMLPSSQSPPPHQNLISQKSLSFSNLLDAMDFSMLSSLLSDNYSNPPGFESAAANSNSEIINLDEQSSKNVHTDNVYLLQRTPQLNPSVQNMENNMHKCQISGLDEDVSYPSKRYLTSSCSFPNNNTNQLENFLLKRSLLNQQLLLGPQDLRFQG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1227 347 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Lele14g1227 347 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Lele14g1227 347 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
Lele14g1227 347 Coils Coil 345 347 - -
Lele14g1227 347 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Lele14g1227 347 PANTHER NAC TRANSCRIPTION FACTOR 56 8 225 - -
Lele14g1227 347 FunFam NAC transcription factor 56 17 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1227 Lele-ChrLele14 21583894 21585117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1227 4 347 NAC Transcription Factor Family AT3G04070 48.603 1.02e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele14g1227 NAM 3.8e-40 No_clan