Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1205 ATGATGAACCCGTTTTCGTCGTCGTCGTCATCCAAGGCCAAAAAGAAGCAAACGGCGACAACAAGCACAGCTACGACAACAATGGCGACAACAACACAAGAGCAAAAACAAGAAACGCCATGGGGAGGGAGGTACCTGGGTGTTCGGAGGAGGCCGTGGGGAAGATACGCGGCGGAGATCCGAGACCCTTCCACCAAAGAGAGGCATTGGCTTGGCACCTTCGACACTGCTGAAGAAGCCGCTTTGGCCTACGACAGGGCAGCTCGGTCCATGCGCGGCTCACGTGCCCGAACCAACTTCGTCTACTCCGATACACCCCCTGGTTCTTCTGTCACCTCCATTATCTCCCCCGACGAGCAAAGCCACCAGAACCACGACTTCTCGTCTTTCTTCGACCAAAATTCACTCACCCAACAATCCTACCCGAATCCTCATCTCTCCGACAGGTTCATAGCGTTTACGGATAGTAATGCTTGGTCTTCATCACCTTCATCTGGGGCTTATAATTATCCACAGCATCAAGTTTCAGCGACGGAGGGCCATAACCTAACACATTTCGAACAACTGTATGATGATAGTAACACTGAGCTCCCTCCTTTGCCGCCAGATATTACGAGCTCCGAGGGATACGACATGGGCAATGGATTTTACGGTAACGAATTCGGGTACTCGGAGCAGAGCGCCGTGACGGAAACAAGCGGGGGATCGTTCTCGTACATGGGTTTTGATTCGGTTGATTACGTGCACAGCCCGATGTTCAGCACGATGCCACCGGTGTCAGATAAGGAGCCGGAGGATTTGGGGAATTCATCGTACTTCTTCTGA 825 0.5236 MMNPFSSSSSSKAKKKQTATTSTATTTMATTTQEQKQETPWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEQSHQNHDFSSFFDQNSLTQQSYPNPHLSDRFIAFTDSNAWSSSPSSGAYNYPQHQVSATEGHNLTHFEQLYDDSNTELPPLPPDITSSEGYDMGNGFYGNEFGYSEQSAVTETSGGSFSYMGFDSVDYVHSPMFSTMPPVSDKEPEDLGNSSYFF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1205 274 MobiDBLite consensus disorder prediction 1 45 - -
Lele14g1205 274 CDD AP2 44 100 IPR001471 GO:0003700|GO:0006355
Lele14g1205 274 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Lele14g1205 274 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Lele14g1205 274 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Lele14g1205 274 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele14g1205 274 MobiDBLite consensus disorder prediction 1 39 - -
Lele14g1205 274 Pfam AP2 domain 45 93 IPR001471 GO:0003700|GO:0006355
Lele14g1205 274 Gene3D AP2/ERF domain 43 102 IPR036955 GO:0003700|GO:0006355
Lele14g1205 274 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 171 - -
Lele14g1205 274 MobiDBLite consensus disorder prediction 99 127 - -
Lele14g1205 274 FunFam Ethylene-responsive transcription factor 2 44 102 - -
Lele14g1205 274 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1205 Lele-ChrLele14 21465737 21466561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1205 34 265 AP2-EREBP Transcription Factor Family AT5G13910 47.737 3.32e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g1205 AP2 1.8e-13 CL0081