Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1199 ATGGTGGATTGCAGGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTTGGGATAATTATAGTTCTGATATGGTTCTGTCTGTTTCACAAGAGCAGTGTTTCTAGAAATTCAGACACAGGGTCTTCTGAACCTTCACAAGTGGGAAGACATGGTGGATTGGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTCTCAGGCTACAAAAAATTTCAGTGACAAGAATCTGATTGGAGAAGGCAAATTTGGGGAGGTTTATAGGGGTTTACTTCATGATGGAATGCTGGTAGTCATCAAAAAGCGCCATGGATTCCCTAGTCAGGAGTTTGTAGATGAGGTACACTTCCTGTCATCGATTCAACACCGAAATCTTGTAACTCTTTTGGGATACTGCCAGGAAAACAATTTGCAGTTTCTCATATATGAATACGTGCCTAATGGGAGTGTCTCCAGTCACTTGTTTGGAGCTGGTCAACAATCACGTGAGAAGCTGGAATTCAAGCATAGACTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTCAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCCGATGCAGGTCTTCGCAACTTCCTAGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGTTGCAGTAGATGAAATCTTCCTTGCTCCTGAAGTGAGAGAATTCAGAAGATTTTCTGAAAAGAGTGACGTATACAGTTTTGGGGTATTTTTGCTGGAACTGTTAAGCGGCAGGGAAGCAATTGAATCACCATCTCCAGATTCAAATCAGAACCTAGTTGAATGGGTGCAAAGTAAGCAAGAACCTGGGATAATGTCGAACATAGTTGATGAAAGAATGGGAATCAATTATACAGAAGAAGGGATGGAAGAGTTTATGTCACTTATAGTTCCATGTATTGATACTTCAAGTGAGAGACGACCAACAATGAGCTATGTGGCGATGGAAATGGATCGAATACTCGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAGGAACCCCAATTGTGACCCTTGGAAGCCAATTATTTAAATCTACAAAATAA 1146 0.4206 MVDCRNLAATVGGAAGAVALVGIIIVLIWFCLFHKSSVSRNSDTGSSEPSQVGRHGGLELTVRDARRFEIEELSQATKNFSDKNLIGEGKFGEVYRGLLHDGMLVVIKKRHGFPSQEFVDEVHFLSSIQHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLFGAGQQSREKLEFKHRLSIALGAAKGLAHLHSFSPRLVHKDFKTANVLVDENFIPKVADAGLRNFLGRVEIAGPSSQVAVDEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGREAIESPSPDSNQNLVEWVQSKQEPGIMSNIVDERMGINYTEEGMEEFMSLIVPCIDTSSERRPTMSYVAMEMDRILEKERNLTTVMGEGTPIVTLGSQLFKSTK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1199 381 ProSiteProfiles Protein kinase domain profile. 80 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g1199 381 Gene3D Phosphorylase Kinase; domain 1 44 152 - -
Lele14g1199 381 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele14g1199 381 Gene3D Transferase(Phosphotransferase) domain 1 153 367 - -
Lele14g1199 381 FunFam Protein kinase superfamily protein 45 152 - -
Lele14g1199 381 SUPERFAMILY Protein kinase-like (PK-like) 66 347 IPR011009 -
Lele14g1199 381 Pfam Protein tyrosine and serine/threonine kinase 84 347 IPR001245 GO:0004672|GO:0006468
Lele14g1199 381 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 16 356 - -
Lele14g1199 381 FunFam Protein kinase superfamily protein 153 366 - -
Lele14g1199 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1199 Lele-ChrLele14 21413104 21415347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1199 20 354 Receptor kinase-like Gene Family AT1G30570 36.080 1.23e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele14g1199 PK_Tyr_Ser-Thr 6.4e-42 CL0016