Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1195 ATGCTCCTTCACGTTCAATATAATCCGGTGGCCCAGTGGGCATTGGGACTTTTGGATACCAGCAGTTCCACTAGTACCACCACCACCTTCCCAATCCCACAAGTAACAGCCTCTTCTGCTTTGATAGAGACTCAGATCAGGCCATCTCAGAATCCACCTCAAGGGAATATTATAGAAAGGAAAAAACATTATAGAGGAGTTAGGCAGAGGCCGTGGGGGAAATGGGCAGCCGAAATCCGAGACCCAAACAAAGCAGCAAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGATGCTGCAGCTGCTTACGATGCTGCAGCTTTGAAGTTCAAAGGCAATAAGGCCAAGCTCAATTTCCCCGAACGTGTAGCTAATTTTCAAGCTCTTCATCCTCCTCCTCCTAGGCCTCCTCGGTCTGAGGCGGCGCCACTGCCGGATTCTTCTCAACCACCATGGCCACCTCCTCCGTCAGACCAGGGGTTCCCAAACCTAATGCAGTACGCTCAGGTGCTTTGTAGTAGGGATGACGATGATCTAGAACGAGCTGCTTCGGGTCTTTATAGTTACCACCAGAGTGTTAATGAGCCATTTCTTTATGATTCTTCTTCATACTTCTCGTCGTCATCGGCAGTGAATTCGGCTTCTTCCACTACGGCTGGATCTGATCAATTTCACGGTGAACAAGTAACGGGAGATCGTGGCTTTTCGGGTTCTTATTACTTTTTTGATAAGGAGACTGATGATTTTGATGGAAGCCACACAAGGTGA 768 0.4883 MLLHVQYNPVAQWALGLLDTSSSTSTTTTFPIPQVTASSALIETQIRPSQNPPQGNIIERKKHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAAAAYDAAALKFKGNKAKLNFPERVANFQALHPPPPRPPRSEAAPLPDSSQPPWPPPPSDQGFPNLMQYAQVLCSRDDDDLERAASGLYSYHQSVNEPFLYDSSSYFSSSSAVNSASSTTAGSDQFHGEQVTGDRGFSGSYYFFDKETDDFDGSHTR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1195 255 Pfam AP2 domain 63 112 IPR001471 GO:0003700|GO:0006355
Lele14g1195 255 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Lele14g1195 255 Gene3D AP2/ERF domain 62 122 IPR036955 GO:0003700|GO:0006355
Lele14g1195 255 MobiDBLite consensus disorder prediction 126 160 - -
Lele14g1195 255 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Lele14g1195 255 MobiDBLite consensus disorder prediction 210 225 - -
Lele14g1195 255 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Lele14g1195 255 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Lele14g1195 255 MobiDBLite consensus disorder prediction 127 160 - -
Lele14g1195 255 CDD AP2 62 121 IPR001471 GO:0003700|GO:0006355
Lele14g1195 255 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Lele14g1195 255 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Lele14g1195 255 PANTHER DNA-BINDING DOMAIN 54 202 IPR044808 GO:0003700|GO:0009873
Lele14g1195 255 MobiDBLite consensus disorder prediction 210 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1195 Lele-ChrLele14 21384754 21388453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1195 45 187 AP2-EREBP Transcription Factor Family AT5G13330 51.351 1.39e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele14g1195 AP2 2e-15 CL0081