Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1184 ATGGAGAGACATATGCTACCAAGAGCTTCTGGCGTCCCCTGGATAGAAGAAGTTGAAGACGCAGCATCTTGGACCAGAACTAACAACGAAGGTGAGTCCAAGGACCAGGACATTGCCTTGGGAGGTCCTCTAACGTCCTTCAAATCCATGCTCGAAGGTGAATGGTACATGGATTCTGCTATCAATTCATCTCATCAAGATCTCCCTGGTCTCCCCGTTCACCAAGAAACCAGTGATATTGGTTTTTGTTCGAATCCAAATGATAATTTCCTGTTGCAGCCTATAGATTCATCTTGTTCACCGTCATTCGCTATCGACCCGGCACAGTCACATCCATTTTTACCATCCAAATCGTGCTTCCCTTCTCTCTTCAACGCTGTTTGCAACAACCCTTTTGAGAACAATGGCTTCGATTTGGGCTCTGAAAGTGGGTTTCTCGGTCACTTCCAGGGAAATCAGCCTTCGAGTTGTCATGTTCTGATGGGATTTTCGGGCCTGAATACTCAACCGCAGATGGGCAACCTCGAGCTTGGTTCTAGCGCTGAATTCACAGCAACTCGTCTGTTGCCTGCTTCTGACAATGGCGTCAGACTTGGTGGCGGATTTAATCCAATGGGTTTAGAAGGATACGATGGTTCCGGAAATGCTCTGTTTTCTAACAAGGCTAAGGTTTTAAGACCACTTGATGTTTTCCCTCCAGTTGGCGCTCAACCCACTCTCTTCCAGAAGCGAGCTGCGCTTCGCCAAACCTCGGGCGGAGCTGATAAATTGGGAGCTTTAGAGATTTTGCCTGCTGGATTTAACGATTATTCAAACATGGAGAAGAAGAGGAAGTTAGAAGACGGCGAAATCGAAGAAGCAAGTATTGATGCGTCTGGAGTGAATTATGATTCTGATGATCTTAATGAGAATAATAAGGCAGAGGAGAATGGGAATAACGGCGGAAGCAATTCTAATGCAAACAGTACTGTTACATGTGGAGACCAGAAGGGGAAGAAGAAGGGATTACCTGCAAAAAATCTCATGGCCGAGAGAAGGCGCAGGAAGAAACTAAATGATAGGTTATACATGCTTCGGTCGGTTGTGCCGAAGATTAGTAAGATGGATAGGGCTTCCATACTTGGGGATGCAATTGACTACTTGAAGGAGCTGCTTCAGCGGATCAACGATCTTCATAATGAACTGGAGTCAAACCCACCTGGTTCGCTGCCACCACCTTCTACAAATTTCCACCCTTTGACGCCCACTCTCCCAACCCTTCCCTGCAGGGTCAAGGAAGAACTTTGCCCTAACTCTTTGCCGAGCTCTAAGAACCAACCTTCGCGAGTGGAGGTTAGGTTAAGGGAAGGGAGAGCTGTGAACATCCATATGTTTTGTGCCCGCAGACCAGGTCTTCTTCTTACCACCCTGAAGGCTTTGGACAGCCTTGGATTGGACATTCAGCAGGCTGTTATCAGTTGTTTCAATGGCTTTGCTTTAGATGTGTTCCGAGCTGAGCAATGCAGAGAGGGCCAGGATGTTGCCCCTGAGCAAATTAAAGCAGTATTGTTGGATTCAGCGGCTTGCCATGGAATGGTTGAGGAGTTTCCCAGTTATGTTTTTGAGCGGAGCATACTTGTCTCTCTCTTTATGTCGAATAATTATGGAATGACCTCCTTTCAGCGGCGAGCCGCCTTAGTGGAACCTCCTCCTTGCCATTCCTCCAGAGTTTGGAGGCTCACGTTCATAATCGAAGCAACCGTAGAGCTTCATCTTCTCTCTTCGAAGGAATCTCATTGTACCGAAAACGTGACTCTTGTTCAATTTTCTACATTTGGAGCTTATCTAAAGGAAACTACCTCTGCATCTTCACCTCCTAAAGCTCTTTCTGACAAGATCGATTTTTATGAAGTTGAAGCGGGTGACTTATGA 1911 0.4652 MERHMLPRASGVPWIEEVEDAASWTRTNNEGESKDQDIALGGPLTSFKSMLEGEWYMDSAINSSHQDLPGLPVHQETSDIGFCSNPNDNFLLQPIDSSCSPSFAIDPAQSHPFLPSKSCFPSLFNAVCNNPFENNGFDLGSESGFLGHFQGNQPSSCHVLMGFSGLNTQPQMGNLELGSSAEFTATRLLPASDNGVRLGGGFNPMGLEGYDGSGNALFSNKAKVLRPLDVFPPVGAQPTLFQKRAALRQTSGGADKLGALEILPAGFNDYSNMEKKRKLEDGEIEEASIDASGVNYDSDDLNENNKAEENGNNGGSNSNANSTVTCGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESNPPGSLPPPSTNFHPLTPTLPTLPCRVKEELCPNSLPSSKNQPSRVEVRLREGRAVNIHMFCARRPGLLLTTLKALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVAPEQIKAVLLDSAACHGMVEEFPSYVFERSILVSLFMSNNYGMTSFQRRAALVEPPPCHSSRVWRLTFIIEATVELHLLSSKESHCTENVTLVQFSTFGAYLKETTSASSPPKALSDKIDFYEVEAGDL 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1184 636 Coils Coil 378 398 - -
Lele14g1184 636 CDD bHLH_AtAMS_like 338 405 - -
Lele14g1184 636 Pfam Helix-loop-helix DNA-binding domain 342 384 IPR011598 GO:0046983
Lele14g1184 636 SMART finulus 341 390 IPR011598 GO:0046983
Lele14g1184 636 CDD ACT_UUR-ACR-like 455 515 - -
Lele14g1184 636 Gene3D - 329 398 IPR036638 GO:0046983
Lele14g1184 636 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 227 521 - -
Lele14g1184 636 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 338 404 IPR036638 GO:0046983
Lele14g1184 636 MobiDBLite consensus disorder prediction 289 335 - -
Lele14g1184 636 FunFam BHLH transcription factor 331 399 - -
Lele14g1184 636 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 335 384 IPR011598 GO:0046983
Lele14g1184 636 MobiDBLite consensus disorder prediction 307 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1184 Lele-ChrLele14 21325452 21330171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1184 23 499 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 55.375 7.14e-149 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele14g1184 HLH 2.7e-09 No_clan